Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0957 ATGATTCTTCCCCAACATACAAATTTAGCTATCGTTCTCACAATATTCATGGCGATCACAACAAGAGCACAAAACTTCACACGCTGCAATAACAAATGCGGAGGGCAAACCCTGCAGTACCCTTTTGGCTTCTCCGAAGGTTGTCCAATCCAATTGAACTGTAACAACAGCCAAGTCCAAATCGGTGAGTTTCTGGTCCAGAACGTAACCAATAGCAACATATTCATCAATCTCCCTGCAAAATGCAACCGTAGCATACAATCCCTTCATCCACTTTTCGGTGCCAAGTTTGCTCCCACTCTGAACAATAGCTTTCTGGTGCAAGATTGTAGAGATGTGTTGGGTGGGTGCGTTATTCCCGCTTCCAGTTTTGTGGGAAGCGAGATTGAGGTGGAAAGTTGCGATAATAGAAGTGGTAATATAAGTTGCTTTTCGAAGCAGCCACAAAAAGATAACGAAGTGAGTGTTGTTAAATACGAGGATTTGAACCAAACTGGGTGCAACTACTTGTTCTCTGCTGTGACTTTTGGGCATAGCAAAGAGATTTCGCTGCAATTTCAGGTGGTAGAGTTGGGATGGTGGCTTCAAGGGGGGTGTCAATGCTCTGAAAACGCTACCTGCACACCACTCCATCTCCACGGAGGAAGCTTCGGGTTCCGCTGTCAGTGCCAAGATGGTTTTCGGGGAGATGGATTCATCAACGGCACCGGTTGCCGGAAAGCTTCAGCTCCAAGTTGCAGTGCTTCAACGTTAACGTCTGGGAGATGTGGGAAAGCAACCAAAATCGGTTTTATTGTTGGAGTGATCATTACTGGAACTTTGGTCGTAGCTGTTCTGTTTCTTCTGTACTACTGTGCCAGGCGCCGTTGTACTTGGTTGGGAAAACATACCAGAGTAAAGCGCCTATTACGTGAAGCTGCAGGCAATTCTAGCGTACCTTTCTACCCTTACAAAGAAATTGAAAGAGCTACAAATTCTTTCTCTGATAAACACAGGCTAGGAACTGGGGCTTTTGGTACAGTTTATGCTGGAAAACTTCACAACGATGAGTGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACACCAACAGTGCTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCAGTGAGTCATCCAAATTTAGTTCGTCTCCTAGGTTGCTGCATAGAGAAGGGGGAACAGATCCTTGTTTATGAATATATGCAAAATGGAACACTGTCTCAGCATTTGCAAAGAGAGAGTGGTAAAGGACTTCCATGGACAATACGACTTACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTCCATTCTGCAATCCATCCTCCAATTTACCATAGAGACATAAAATCCAGTAATATACTCTTGGATTATAACTTCAAATCTAAAGTGGCTGATTTTGGGCTTTCTAGGCTTGGAATGACAGAAACATCTCATATCTCAACTGCCCCACAAGGGACTCCAGGTTATGTTGATCCACAATACCATCAGAATTTTCATCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTAGTTTTGGTGGAGATAATAACTGCCTTGAAAGTGGTTGATTTTGCTCGACCTCAGAGTGAGGTCAACTTGGCTGCACTTGCTGTTGATAGGATTAGGAGGGGTGCGGTAGATGAGATCGTAGATCCTTTCCTTGAACCACATAGAGATGCTTGGACACTATATTCTATTCATAAGGTGGCTGAGATTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAAGAGCTAGAACACATCAGACACAGCGGATGGGCAACTATGGAAGAAACTATCATGGCTTCATCTGTTGGCTCTGCAAGTTCATCACCTCGTCATGGAAGTGAGAAGTCACTTGGTGGTATTAAGAAAAGTGGGCAAGGGAGTGAGAGATTGATTGTCCCACAGAAAACCGAGAGTTTTTTGCAATCTGTGGAGGTGAAAGACAACTCACCTGTATCAGTGCATGATCGTTGGTCAAGTGGACAGAGTTCACCTTCAACAAACAGCTTGTTGGGAAATGTCGTTCGGTGA 2079 0.4387 MILPQHTNLAIVLTIFMAITTRAQNFTRCNNKCGGQTLQYPFGFSEGCPIQLNCNNSQVQIGEFLVQNVTNSNIFINLPAKCNRSIQSLHPLFGAKFAPTLNNSFLVQDCRDVLGGCVIPASSFVGSEIEVESCDNRSGNISCFSKQPQKDNEVSVVKYEDLNQTGCNYLFSAVTFGHSKEISLQFQVVELGWWLQGGCQCSENATCTPLHLHGGSFGFRCQCQDGFRGDGFINGTGCRKASAPSCSASTLTSGRCGKATKIGFIVGVIITGTLVVAVLFLLYYCARRRCTWLGKHTRVKRLLREAAGNSSVPFYPYKEIERATNSFSDKHRLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLSSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRESGKGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPQSEVNLAALAVDRIRRGAVDEIVDPFLEPHRDAWTLYSIHKVAEIAFRCLAFHSDMRPTMMEVAEELEHIRHSGWATMEETIMASSVGSASSSPRHGSEKSLGGIKKSGQGSERLIVPQKTESFLQSVEVKDNSPVSVHDRWSSGQSSPSTNSLLGNVVR* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0957 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Apr7g0957 692 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 669 IPR045274 GO:0007166
Apr7g0957 692 SMART serkin_6 327 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0957 692 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Apr7g0957 692 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 669 - -
Apr7g0957 692 MobiDBLite consensus disorder prediction 618 692 - -
Apr7g0957 692 Gene3D Phosphorylase Kinase; domain 1 289 402 - -
Apr7g0957 692 SUPERFAMILY Protein kinase-like (PK-like) 307 601 IPR011009 -
Apr7g0957 692 Gene3D Laminin 199 234 - -
Apr7g0957 692 Gene3D Transferase(Phosphotransferase) domain 1 403 619 - -
Apr7g0957 692 MobiDBLite consensus disorder prediction 646 692 - -
Apr7g0957 692 Pfam Protein tyrosine and serine/threonine kinase 330 599 IPR001245 GO:0004672|GO:0006468
Apr7g0957 692 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0957 Apr-Chr7 16584038 16588988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0957 9 692 Receptor kinase-like Gene Family AT2G23450 58.333 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr7g0957 PK_Tyr_Ser-Thr 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0957 - - gmx:100779130 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0957 7 16584038 16588988 Apr3g0224 3 4056683 4061489 PCT