Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0937 ATGTCGTCATCATCAAACTCGCCGTGCGCGGCGTGCAAGTGTCTGCGGCGAAAGTGTACCCAAGAGTGCGTGTTCGCGCCGTATTTTCCTCCGGACAACCCTCAGAGGTTCGCTTACGTGCACAAGGTTTTCGGCGCCAGCAACGTGGCAAAGCTGCTCAACGAACTCAGCGCAGCTCAGCGAGACGACGCCGTTAAGTCCCTGGCTTACGAGGCTGAAGCGCGTCTCAGAGACCCTGTTTACGGTTGCGTGGGCCTCATCTCCGTCCTTCAACACAAGCTCAGGCAGATCCAAGTGGAACTCAACAATGCCAAAAAGGAACTCGCTACTTATATTGGTCCTCAAGCTATGCAGGGCATGCACGCCCCCATTCTCCAACACCACCCCAACAACCCCTTTTCCTCCACCATTTATGGCAACATGCCGGCGGTGGCGGCCGCCGCACACGGCAGCCAGTTAATGATTCGGGACGCTCAGCCACAGCAGCATCAGATCTTGGAGGCTCAGCAGTTGGCTGCGGCTGTGGTAGCGAGAGAGCAGCAAGAGATGTTTAGGAGTTATGAGAATCAACAGCAACAGGAGTTTCTGCGGTTCAGTTGTGGGTTCGAAGTTGGTTCGGTTTCTTCTGGTGGTGGGTTCAGCCAGGTGTCCCCAGGTGCTGCTTCAGCTGATCAGTTGTCTCCCTCGTTGGCTTTGGGATCCTTTGACAGTGCTTACCACATGCAGCAACCACAGCAAGGAGAACCTCATCCTCATCCTCACCCTCTTCCACTTGAGGCACAGCTATTGCTCCCTCCGCAGCAGAAGCAAGAGTCACAACTTCCCCTTCACCAGCAACAGCCCGAAAACGAGGAGTGTAGGAGTGTTGGTCCATCTTGTTGA 882 0.5522 MSSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELSAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHKLRQIQVELNNAKKELATYIGPQAMQGMHAPILQHHPNNPFSSTIYGNMPAVAAAAHGSQLMIRDAQPQQHQILEAQQLAAAVVAREQQEMFRSYENQQQQEFLRFSCGFEVGSVSSGGGFSQVSPGAASADQLSPSLALGSFDSAYHMQQPQQGEPHPHPHPLPLEAQLLLPPQQKQESQLPLHQQQPENEECRSVGPSC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0937 293 Coils Coil 87 107 - -
Apr7g0937 293 MobiDBLite consensus disorder prediction 265 287 - -
Apr7g0937 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 274 - -
Apr7g0937 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 3 274 - -
Apr7g0937 293 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Apr7g0937 293 MobiDBLite consensus disorder prediction 241 293 - -
Apr7g0937 293 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0937 Apr-Chr7 16429274 16432657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0937 3 227 AS2 family AT5G66870 55.556 2.00e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr7g0937 LOB 4.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0937 - - gmx:102664012 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0937 7 16429274 16432657 Apr3g0173 3 3135847 3136737 PCT
Apr3g0174 3 3141312 3141944 Apr7g0937 7 16429274 16432657 PCT