Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0911 ATGGATAGAAAGCAAGAACAAGACAAGGGGAACTCGAATCTGTCTAGCATTGATGTTACTCTAATATCTCCAAAAGTCCCAAAAGCAGTTTCCCCAGTTTCTTCTGCAGCAGAGGGAGACACCTTAAGGAGGCCACGTGGCAGGCCTGCTGGCTCCAAAAACAAACCTAAGCCACCAATAATTGTCACAAGAGACAGTGCTAATGCACTCAAGGCTCATGCCATGGAAGTGAGCTCTGGTTGTGATGTAAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGCCTTTACATACTAAATGGAACAGGTTGCGTAACAAATGTGACATTGCGCCAACCAGGTTCATCTGGTGCCATTGTGACCCTTCATGGTAGATTTGAGATTTTGTCACTGTTGGGTTCAATCCTTCCTCCACCAGCACCACCAGGGATCACAGGCCTTACAATTTACTTAGCAGGTGCTCAAGGGCAAGTTGTGGGAGGTGCTGTTGTTGGTACTTTGATTGCTTCAGGTCCTGTTGTTATCATGGCTGCGTCATTCATGCATGCTACTTTTGATCGTCTACCATTAGAAGATGATGAACTTGCTGCTGCAATGCAGAATCAGCATTACCAAAATGGACGCACCCATCATCTTGATATCTCTGATTTATATGCAATGCCACAGAACTTGATCATGAATGGTACAATGCCCCCGGAGATATACTCTTGGGCACCGGGGAGGAACTTGTCAAAATCCTGA 747 0.4538 MDRKQEQDKGNSNLSSIDVTLISPKVPKAVSPVSSAAEGDTLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLYILNGTGCVTNVTLRQPGSSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGTLIASGPVVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRTHHLDISDLYAMPQNLIMNGTMPPEIYSWAPGRNLSKS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0911 248 ProSiteProfiles PPC domain profile profile. 67 205 IPR005175 -
Apr7g0911 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 247 IPR014476 GO:0003680
Apr7g0911 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 2 247 - -
Apr7g0911 248 Gene3D - 71 207 - -
Apr7g0911 248 CDD DUF296 73 153 IPR005175 -
Apr7g0911 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 182 IPR005175 -
Apr7g0911 248 MobiDBLite consensus disorder prediction 1 61 - -
Apr7g0911 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0911 Apr-Chr7 16125025 16125771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0911 26 247 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 73.214 9.46e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0911 - - vra:106765118 442.965