Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0910 ATGGATGTGGACATACTGAAAACTTGTACGAGTGACAGCAGCATGGACATGATGGCAATGATGATGCAAATGGAAAAATTTCCTGAATTATGTGAACCTTTATATAACACTCTAACCTACCCAGAAAGCGAGTTCTTAGGTGGAAGCTCAAGCTCAACCACCACCACCACTTTGCCCGTGTTCTCCAACATTAACCCAAATGTAATAACTCCTTCTCCACCATCCTTGATTAATCCACCGCCCTCCCCTCCTAATTTCCTTAACAACCCTCTCCAACAACCCATGACACCTCCTCTTCAACCCAATGTTTCATTTTCGGAGAAGAAGAATTCTGTGGCGGCTATGAGGGAGATGATTTTCCGTGTAGCGGTTATGCAACCCATTCATATAGACCCAGAATCTATCAAGCCACCAAAGAGAAGGAACGTGAAGATTTCCAAGGATCCGCAGAGTGTGGCAGCGAGGCACAGAAGAGAGAGAATAAGCGAGAGAATAAGGATCCTTCAGAGATTAGTTCCTGGTGGGACCAAAATGGACACCGCTTCTATGTTAGATGAAGCTATACACTACGTGAAGTTCTTGAAGAAACAAGTGCAAACGCTGGAACAAGCAGGGGCAAATAGACCCCTAAATGCTGTTGGGTTTCCCGTGGTGTCCAACACCAATAATGTTAATTATTCTGCTTTTGTCAAGGGTTGCCAACCTTGTCAAATGCTGGGTTCTGCTTCTAAACAAATGCTCAGTTGA 747 0.4444 MDVDILKTCTSDSSMDMMAMMMQMEKFPELCEPLYNTLTYPESEFLGGSSSSTTTTTLPVFSNINPNVITPSPPSLINPPPSPPNFLNNPLQQPMTPPLQPNVSFSEKKNSVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGANRPLNAVGFPVVSNTNNVNYSAFVKGCQPCQMLGSASKQMLS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0910 248 PANTHER TRANSCRIPTION FACTOR HEC2 1 243 - -
Apr7g0910 248 Coils Coil 184 204 - -
Apr7g0910 248 CDD bHLH_AtIND_like 146 202 - -
Apr7g0910 248 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 243 IPR045843 GO:0003700|GO:0006355
Apr7g0910 248 Pfam Helix-loop-helix DNA-binding domain 155 194 IPR011598 GO:0046983
Apr7g0910 248 SMART finulus 151 200 IPR011598 GO:0046983
Apr7g0910 248 Gene3D - 144 211 IPR036638 GO:0046983
Apr7g0910 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 203 IPR036638 GO:0046983
Apr7g0910 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 194 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0910 Apr-Chr7 16115856 16116602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0910 24 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 56.410 2.16e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g0910 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0910 - - gmx:100796649 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0910 7 16115856 16116602 Apr7g0910 7 16115856 16116602 ECH