Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0906 ATGCCCAATCATTCCACCGCCACAATGAACGATCAACTATCCAACCCCACCTCCATTTTCGGCCTCCGTCTATGGGTGGTTCTCGGTGTTTGTGTCGGCGCCGCCATTGTTCTTCTTCTCTTTCTCATCTCTATATGGCTCGCTTTCAAGCGTTCCAAGACCAGCCCTTCTATTCCCGACGTATCCAAAGAGATCCAAGAAATCAGAGTCGTCGACCATGCTCCGAATCCCGCCCTCCAACCCGACCCGTTTCCCGAACCCGAACCTATTCCTTCCAACGAGCGACAATCCTTGCTTTCTATTCCTCCCGAAGATGAAACAAATTCTCTCGCCTTCAACAGAATTCAGTTTGAGATTGGGAAGAATCATCGAATCTCGTACCCTGAACGTGCCTTCGTTCGGTCTGGTTCGAATGAGGAACCTCGACCCGTGGATCAGGTTCCGACTGTGATTCCTGAAGTTTCTCATTTGGGCTGGGGCCACTGGTACACTCTCAGGGAGCTTGAGGATTCTACTAGTGGGTTTGCTCCCGAGAATGTTATTGGTGAAGGTGGATATGGGATTGTGTATCATGGTATTTTGAATGACAATACTCATGTTGCTATCAAGAATCTCCTCAATAATAGGGGACAAGCTGAGAAAGAGTTTAAGGTTGAAGTGGAAGCTATAGGACGTGTTCGTCACAAGAATTTAGTGAGGTTGCTTGGTTATTGCGCTGAAGGAGCTCATAGAATGCTTGTGTATGAGTACGTTGACAATGGTAACTTAGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTAACATGGGAAATTCGAATGAACATTATTCTAGGAACGGCAAAAGGGTTAACTTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGCTTAATAGGCACTGGAATGCGAAGGTGTCAGACTTTGGCCTTGCCAAACTCCTTGGCTCCGATAACAGCTACATTACAACCCGTGTCATGGGTACATTTGGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAAAGAAGTGACGTGTATAGTTTTGGAATTCTTATCATGGAAGTAATTACAGGAAGGAATCCAGTTGATTATAGTCGGCCTCCTGAAGAGGTGAATTTAGTTGACTGGCTCAAGAAGATGGTTAGTAACAGAAATCCAGAGGGGGTATTGGATCCCAAGCTCCCTGAGAAACCAACTTCGAGGGCACTAAAGCGAGCCCTTCTTGTAGCCTTACGATGCACGGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTCATACACATGCTTGAAGCCGAAGATTCTCCCTACAAAGAGGATCGCAGAGCTAGAAGGGATGCTGGACATTCACCTAACGATAGAGTAGGGGATGGATTGAAAGAGGAGGCAGCTGTATCAGTTGATGCTTGTAAACTTGAAAACGGGATGTGTGCCAATGAGACAAGATCAAACCATCAAATAGAAAAGCAATAA 1521 0.4602 MPNHSTATMNDQLSNPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLAFKRSKTSPSIPDVSKEIQEIRVVDHAPNPALQPDPFPEPEPIPSNERQSLLSIPPEDETNSLAFNRIQFEIGKNHRISYPERAFVRSGSNEEPRPVDQVPTVIPEVSHLGWGHWYTLRELEDSTSGFAPENVIGEGGYGIVYHGILNDNTHVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLNRHWNAKVSDFGLAKLLGSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARRDAGHSPNDRVGDGLKEEAAVSVDACKLENGMCANETRSNHQIEKQ* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0906 506 PANTHER OS01G0323000 PROTEIN 1 496 - -
Apr7g0906 506 Gene3D Transferase(Phosphotransferase) domain 1 251 463 - -
Apr7g0906 506 Pfam Protein kinase domain 178 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0906 506 PANTHER RECEPTOR-LIKE KINASE PLANT 1 496 - -
Apr7g0906 506 Gene3D Phosphorylase Kinase; domain 1 154 250 - -
Apr7g0906 506 SUPERFAMILY Protein kinase-like (PK-like) 151 447 IPR011009 -
Apr7g0906 506 MobiDBLite consensus disorder prediction 75 94 - -
Apr7g0906 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Apr7g0906 506 CDD STKc_IRAK 181 447 - -
Apr7g0906 506 SMART serkin_6 175 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0906 506 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
Apr7g0906 506 ProSiteProfiles Protein kinase domain profile. 175 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0906 506 MobiDBLite consensus disorder prediction 446 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0906 Apr-Chr7 16083372 16086513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0906 152 449 Trihelix Transcription Factor Family AT1G70460 46.865 1.58e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr7g0906 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0906 - - gmx:100797726 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0906 7 16083372 16086513 Apr7g0906 7 16083372 16086513 ECH