Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0901 ATGGGTGACATGTACCATTTTGACAAAAACCTCTCTTCTTCCTCTTCTCAAGATGAAATCTCACTTTTTCTGCGTCAGATTCTCCTCCGTTCGTCTTCTTCTTCTCACCCCATCCCTGGATCCTGCAACCACAACGCTTCTCAGCAAAACACCATCAATGCACACCCTTATCTCATATCTTCACCGCTTCATGATGGGAAGATCTCACCCCTTGATTCCGCTGCTGCAGGTGGTTCTGCTGCAAATGTGTCTTCTTCTTCTGTTGGAGTTAGCGAGAACGAGAATGATGACTATGATTGTGAAAGTGAGGAGGGCGTTGAAGCTTTCGCTGAAGAAGTTCCAACAAAGCCTATTCCTTCTAGGAGTTCATCTAAAAGATCAAGAGCTGCAGAAGTTCATAATTTGTCTGAGAAGCGAAGAAGGAGTAGGATTAACGAGAAAATGAAGGCTTTGCAAAATCTAATTCCAAATTCTAACAAGACTGATAAGGCTTCGATGCTCGATGAAGCTATTGAATACCTGAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAATGGATTGAGTTTGCATCCAATGTGTTTTCCTGAAGGCTTGCAGACTCTGCAGTTGTCTCAGATGAGTTTGGAGTTAAGTGAAAGAAACAGGTCTACCCCTTTAAACATGACAGCTACTCTGCCTCTGCACCAAGAGAACCCCTTGCACTATGCATCCAATCTGCCTAACAAACACACTGTGCCAAATCAGCCATCAGCACCCTATCCTTCATACATTAACAACTCAGAAACTTCTTTTGGTATAGAACCCCACATTCCACAGCATATAAAACCCCTTCAACCCAGAGGGTCTTCTGAGCAGATGCGAGGGGAAGGCATATTGCAGCACCGGCAATCGAGTGTTATCCATTCAGACACCAATACCTTAGGTGGTTCTCAAGCTGTGGAAGAATTCAAGTCAGGCACGACAGCATCACTCTCTTTTGACACGCAAACATGTGAACTAAAGGACAACAACTCTTTGCAAACATGCATTGCCGGAAGAAACAGCGAGCCCAACATTGTTCTTACATCACAGTTAAGTAGGTAA 1092 0.4405 MGDMYHFDKNLSSSSSQDEISLFLRQILLRSSSSSHPIPGSCNHNASQQNTINAHPYLISSPLHDGKISPLDSAAAGGSAANVSSSSVGVSENENDDYDCESEEGVEAFAEEVPTKPIPSRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCFPEGLQTLQLSQMSLELSERNRSTPLNMTATLPLHQENPLHYASNLPNKHTVPNQPSAPYPSYINNSETSFGIEPHIPQHIKPLQPRGSSEQMRGEGILQHRQSSVIHSDTNTLGGSQAVEEFKSGTTASLSFDTQTCELKDNNSLQTCIAGRNSEPNIVLTSQLSR* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0901 363 MobiDBLite consensus disorder prediction 78 93 - -
Apr7g0901 363 SMART finulus 134 183 IPR011598 GO:0046983
Apr7g0901 363 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 12 308 IPR031066 -
Apr7g0901 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Apr7g0901 363 Coils Coil 167 187 - -
Apr7g0901 363 Pfam Helix-loop-helix DNA-binding domain 132 178 IPR011598 GO:0046983
Apr7g0901 363 PANTHER TRANSCRIPTION FACTOR SPATULA 12 308 - -
Apr7g0901 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 188 IPR036638 GO:0046983
Apr7g0901 363 CDD bHLH_AtPIF_like 129 190 - -
Apr7g0901 363 Gene3D - 123 187 IPR036638 GO:0046983
Apr7g0901 363 MobiDBLite consensus disorder prediction 70 140 - -
Apr7g0901 363 MobiDBLite consensus disorder prediction 126 140 - -
Apr7g0901 363 MobiDBLite consensus disorder prediction 94 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0901 Apr-Chr7 16037526 16040489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0901 15 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 41.210 3.35e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g0901 HLH 4.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0901 - - gmx:100793754 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0901 7 16037526 16040489 Apr7g0901 7 16037526 16040489 ECH