Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0900 ATGAGATTTCTCTCATCTCCAAGCTCTCCCAATAGGTCTGGTGATGGAAGGTTCCCAGTTAGGCTTGCTGGAACAAATCTTCGCCCTTATGGTGAGAGTTCTAGTGTTGCACCAATCAACAATGATCAAAACAACTTAGGTGTTTTTCCTCGTGAGTCATTTGCAATTGGACCATTCGGAATGAACGTTTCTTCTTCCAGTTCATTCCCTGCCAGTTTCTCAGGTAGACACTTTGGGCTAAACTCGAATCATTTCCTTCACCCGAGGAGTGGTAGTAGTAATATTACTCCAAGCAATGGTGGCAGTGCTGTTGACATGCATTTAGCAGCGGAACATGTAGGGAACAACCATTACAACAATCAAAATTTGCCATCATATTCTGTATCCCTACATCCACATGGATCAAATGCCAGTTCTTCTGCTGTGAATGCAAATAACAGTGCTGAATATGTGGTGGAAGAACGAGGTGGTGTAGATGGCAACTCACCAAACATGAGGCACTTGCCCTTCAAGAGAAGATATGATGATGAGTATGCTTTGTCAGAATTTGCTGTTGGTGAAAGTTCAAGCATGGGAGCACAAGATGCACGAAACCCCAGACGAAGGGTTGATCCTTTTCAAGTCAATGCCATCGGCACGTGTCCTTTTTCTGGATATGGCCATTCGGGGAACTCTACGGTTGAAATTGGCCACAGTGCTACATGCCCAGTTTCTAATGAAATTGGACAAACTCAAAACCTTCAAAGTCACAACAATCTTCAAGTTAACATGTTGTCATCAAGAGGGCATTTCCAACGTGACCACCCTCCTTTCTTTGACCATGAAGAAACTTCACTTGGTGGGTTTGGCTTGGAGCATCCAATGGAGTATGCTCCTAATGTTCTTGAAACTCAACAGGCTCTTTGGAGTAACAGCATTATGAGGCCAAGATATGCTCGTGATGCATCTTATTCTGTGATGGGAAGAACAAGTGATGAAGGTATGAATATGATACCTTTTGATAACAATATTCCTGCTGCAGGTAATTTCATGAGCCCTCAAATTGGAACTGGAAGTAATTGGTCAAGCAATGGAAATGCAAACATCCTTGGATGCTTTTCACCTACTTCTTCCAATCAACTTCGTTCTGCTCATGGTAATGAACCATCAAATGCTGGTGCATCGATTCACAGGTTGGAAGTTTATGAACAATACATAAGGCTATCGCCTATTACTGCAAGCCAACTTGTGGCTTCATCTATCGGTTCATATCAGCCAAGAAATCCTAGCCTACCACTTTTACCTTCAGAAATCTCACAGGGAAGCTTCAACGTTGGAGTTGTATCCGAGAACCAGCAAAACTCTTTTGCAAGATTGGAGAATCGAGCTGGTGCTTCTGCAGTCAATCTTACAGCAGCTGAAATGCTCAGCACTATGTGGGAAGAGGTTCGCAGTGTCCTAGAATTTCTGCGCGAAGATATCCCATTGCAGACAGAGGGATTGCTGATTCTCGAGGACTCAATTGTAATAAATATGGCGCAACCTGATTCAATCCCAGATTGGCGATATTTTCCATTATCCGCAAATTTCGTGCCCTATGAGATGATCGCTGCTCTACAACGTCATCTAGGCCACGCGGAGGCAGGACTCCGTGAGGAATATATTCTATCGAACATTGAGCGTGAAATTTTCCAGTCCATCACTGAGGGGAGTCCACAAAATGAAACCTGCAGCATATGTCTGGAGGACTATGTCAATGGAGAAGAACTTGGGAAACTGAATTGCCGCCACAAATTTCACGTTAGCTGCATCAAAGATTGGTTGGTTCTGAACAACACATGCCCCATTTGCAAGAGAACCGCGCTGGCTGTTGAAGATGACCAAACTGCTGAGGGAACAGTGTGA 1884 0.4395 MRFLSSPSSPNRSGDGRFPVRLAGTNLRPYGESSSVAPINNDQNNLGVFPRESFAIGPFGMNVSSSSSFPASFSGRHFGLNSNHFLHPRSGSSNITPSNGGSAVDMHLAAEHVGNNHYNNQNLPSYSVSLHPHGSNASSSAVNANNSAEYVVEERGGVDGNSPNMRHLPFKRRYDDEYALSEFAVGESSSMGAQDARNPRRRVDPFQVNAIGTCPFSGYGHSGNSTVEIGHSATCPVSNEIGQTQNLQSHNNLQVNMLSSRGHFQRDHPPFFDHEETSLGGFGLEHPMEYAPNVLETQQALWSNSIMRPRYARDASYSVMGRTSDEGMNMIPFDNNIPAAGNFMSPQIGTGSNWSSNGNANILGCFSPTSSNQLRSAHGNEPSNAGASIHRLEVYEQYIRLSPITASQLVASSIGSYQPRNPSLPLLPSEISQGSFNVGVVSENQQNSFARLENRAGASAVNLTAAEMLSTMWEEVRSVLEFLREDIPLQTEGLLILEDSIVINMAQPDSIPDWRYFPLSANFVPYEMIAALQRHLGHAEAGLREEYILSNIEREIFQSITEGSPQNETCSICLEDYVNGEELGKLNCRHKFHVSCIKDWLVLNNTCPICKRTALAVEDDQTAEGTV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0900 627 MobiDBLite consensus disorder prediction 1 24 - -
Apr7g0900 627 Pfam Ring finger domain 569 611 IPR001841 -
Apr7g0900 627 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 533 615 IPR013083 -
Apr7g0900 627 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 130 616 IPR045191 GO:0061630
Apr7g0900 627 CDD RING-H2_PA-TM-RING 569 611 - -
Apr7g0900 627 ProSiteProfiles Zinc finger RING-type profile. 570 611 IPR001841 -
Apr7g0900 627 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE 130 616 - -
Apr7g0900 627 SMART ring_2 570 610 IPR001841 -
Apr7g0900 627 SUPERFAMILY RING/U-box 565 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0900 Apr-Chr7 16025274 16029267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0900 475 617 C3H Transcription Factor Family AT2G15530 36.735 5.80e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0900 - - aprc:113870256 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0900 7 16025274 16029267 Apr7g0900 7 16025274 16029267 ECH