Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0897 ATGGCGTCGAAGCCTTCGCCGTCGCCTTCTTCTTCCAGATCGGAGCCTCCCGTCGATCCCTCCACAAAGAATGTGGAGGCTTCAAGTCCTACGGTTAAAGATGTGTTACTGGTTATTGATTCTTTTAAGAAACAAGTTGCTGCTGAGCGGATTGTTTCTGTGAAGAAAAGAATGGAAGAAAACAGACAGAAGTTGGTTGGTGTCACAAACCATCTCTGCAAAATGTCGATGGAGAGGAGGAGCTGTGGCATTACTGACATGAGTGGAAGTCTGGACCTACTGACAAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTCATGCAACTAATGGTGATATGGAGAGCAATGGCTATCATGAAGATAGCCATGGTTCGACAGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGTCCTATCAAGCTGCCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTTGTAGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAAGAGGAAATTATGGACGATGAAGAGGAAAAAAGAGAATTTATAGAATCTGAAGATTATATACTTTGCATGACTGTCAAAGAGTTTGGTCTATCTGACATTGTTCTGGAGTCACTGGCTCAGTGTTTTTCTAGAAACACTAGTGATATTAAGGCAAGATATGAAACTCTTAGTAGTCAAGACAATCCTGGTGGGGTTTCCAAGAATGGAGATACTGAAGAGAATTCTCAAAGTGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGCAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTATGTGGATCCCTCCTGATACTGAAAATACATCGTGTGGGCCAAATTGTTTTCGATTGGTACTTAAGTCAGAAAGATTTGCCAAAACCTCATCTACCCAGGCTGATGTAGAAGAGAAAAGCTCTGGTAGTGCTTTATCTAGGAAAAAGTCTTCTGCTAAAAGGCGGATGAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCAGGACGAGATGCTGTTTCAGCCTCCCACTCGGCACCACCTAAAACTAAACCTGTGGGGAAAGGTGGAATTGGTAAGAGAAACAGTAAGCGAGTGGCAGAACGAGTCCTAGTTTGCATGCAGAAGCGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCAATTAGTGAAGCTCCTGACCGTTCATCGAATGATACAGTTATTGACCCACATGTTATGAGCAGTGAAGACAACACTAGGAAAGAGGAGTTTGTGGATGACAATGTTTGTAAACAGGAATTGACAGATAATAAAGCTTGGAAAGATCTTGAAAAGGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTCTTAAATGGTCTAAAGACATGTTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGAAAGATGTCTGGACCTCCTGGGGATGCTGCAAATTCCCTTGTGGAAGGTTATTCCAAGGGTAATAATGAAGTGAGACGAAGGTCTAGATTTTTACGTAGAAGAGGAAGAGTCCGTCGGTTGAAGTACACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGGCAGTATAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAATGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTATTGTGGGTGTCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCCAAGAGTCAATGCCGAAGTCGTCAATGTCCCTGCTTTGCTGCAGATAGGGAGTGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACTCTTGGGATTCCTAGCCAAAGGGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAACAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCAGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACCGGAGAGCTGATTTCTCATCGGGAAGCAGACAAGAGAGGAAAGATATATGACCGCGAAAATTCATCTTTTCTATTTAATCTGAATGATCAGTTTGTTCTCGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCAAACCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCACAGGGTAGGCATTTTTGCCAAGGAACGGATTTGTGCTGGGGAAGAACTGTTTTATGATTATCGTTATGAGCCCGATAGAGCTCCCGCCTGGGCTAGGAAGCCAGAGGCATCGGGATCAAAAAAAGAGGACGGGGCTCCCTCAAATGGTCGTGCCAAGAAGCTTGCTTGA 2583 0.4255 MASKPSPSPSSSRSEPPVDPSTKNVEASSPTVKDVLLVIDSFKKQVAAERIVSVKKRMEENRQKLVGVTNHLCKMSMERRSCGITDMSGSLDLLTKRQKDAIDMHNGVHATNGDMESNGYHEDSHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMDDEEEKREFIESEDYILCMTVKEFGLSDIVLESLAQCFSRNTSDIKARYETLSSQDNPGGVSKNGDTEENSQSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPMWIPPDTENTSCGPNCFRLVLKSERFAKTSSTQADVEEKSSGSALSRKKSSAKRRMKCSQSESASSNAKNISESSDSENGPGRDAVSASHSAPPKTKPVGKGGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEAPDRSSNDTVIDPHVMSSEDNTRKEEFVDDNVCKQELTDNKAWKDLEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEEGKMSGPPGDAANSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSNGRAKKLA* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0897 860 MobiDBLite consensus disorder prediction 376 403 - -
Apr7g0897 860 SMART set_7 711 832 IPR001214 GO:0005515
Apr7g0897 860 MobiDBLite consensus disorder prediction 347 426 - -
Apr7g0897 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 467 858 - -
Apr7g0897 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 9 456 - -
Apr7g0897 860 ProSiteProfiles SET domain profile. 711 826 IPR001214 GO:0005515
Apr7g0897 860 MobiDBLite consensus disorder prediction 249 274 - -
Apr7g0897 860 MobiDBLite consensus disorder prediction 1 28 - -
Apr7g0897 860 ProSiteProfiles CXC domain profile. 597 696 IPR026489 -
Apr7g0897 860 Gene3D SET domain 611 828 IPR046341 -
Apr7g0897 860 CDD SET_EZH 711 827 - -
Apr7g0897 860 Pfam CXC domain 649 680 IPR041355 -
Apr7g0897 860 MobiDBLite consensus disorder prediction 442 479 - -
Apr7g0897 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 9 456 IPR045318 GO:0006338|GO:0018024
Apr7g0897 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 467 858 IPR045318 GO:0006338|GO:0018024
Apr7g0897 860 MobiDBLite consensus disorder prediction 834 860 - -
Apr7g0897 860 Pfam SET domain 722 825 IPR001214 GO:0005515
Apr7g0897 860 SUPERFAMILY SET domain 585 831 IPR046341 -
Apr7g0897 860 SMART CXC_2 645 682 IPR033467 -
Apr7g0897 860 MobiDBLite consensus disorder prediction 450 472 - -
Apr7g0897 860 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 860 IPR025778 GO:0031519
Apr7g0897 860 MobiDBLite consensus disorder prediction 834 853 - -
Apr7g0897 860 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0897 Apr-Chr7 15999570 16008367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0897 700 829 C2H2 Transcription Factor Family AT2G23740 27.211 7.48e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr7g0897 SET 8.4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0897 7 15999570 16008367 Apr7g0897 7 15999570 16008367 ECH