Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0894 ATGTGGGATCTGAATGACTCCCCCGATCAGAGAAAGGACTACGAATCAGAAGGGTGTTCTTCTCTAAAGGAAGGAGATGATGATAAAGGCAAGAGGGTTGGATCTGTTTCCAATTCAAGCTCCTCTGCAGTGGTCATCGAGGATGGATCGGAAGAAGAAGACGGTGACAGGGGTGGAAGCAGAACGTTCAAGAAAAAGAGTAGCAAGATATTCGGGTTCTCAGTGACCCATCATGACAGTGACCGCCCACCCGTGACCGTGACCCGCCAGTTTTTTCCGGTGGAAGATTCCGATGTGGCTCTCCCCTCCGGCGGCGGAGGAACCTCGAATTCCTTCCCTCGCGCTCACTGGGTAGGCGTCAAATTTTGTCAATCAGAAACTCTCGGCGCCGGAAAATCCGTGGAAGTGTCGCAGCCTATGAAGAAGAGTCGGCGAGGACCAAGGTCACGGAGCTCACAGTATAGGGGAGTTACCTTTTACAGAAGAACAGGTCGATGGGAGTCTCATATATGGGATTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCCGCAATTAAGTTCCGAGGAGTGGAGGCAGACATCAATTTCAATATAGAAGACTATGAAGATGATTTGAAGCAGATGAGCAATCTAACCAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGATTTCCTAGGGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGGATGGGCCAATTTTTAGGCAAAAAATACGTTTATCTGGGTCTGTTTGACACCGAGATTGAAGCTGCCAGGGCATATGACAAAGCAGCAATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATATACGACAAGGAGCTTAACTCGGAATCCTCAGGTGTAGCTGCAGATCACAATCTGGATTTGAGTTTGGGCAATTCGAGCTCTAAGCATAGCAGTAGTCAAGCATTGGGAAATCAACCCCCAAATTCTTCAACCGATCAGCATATGGCACTCGAATCTAATTGGCGGAATGGGGGAAGCAAGCCTAAGGTTCATCTGGTGAACATACTACCGAAACCATGTGGTAGAAGCAACATGGAAGCATATGCAAGAGATGGTCAGGGGGAAAGTGAAGCCTTGCGGTTGCTTAGCCAAACTCGCCTTCATTCTCCACCCACTAATGAAATGCATAGATATGGTCCGTATAGGTCGCCAGCAGAGCCTCCTCAAATGCCTCAGAATTTTGTAAATCTTCACCCACCAAATTTTCATGTTTCCAGCAGCAGCAACGGAGGCCGTATTGGAAGTGATCTTTCATTGTCAATGTCGGAGCAACAATGGCAACCGGGGCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCGCAGATTAGACCCTCGCAAGGTTGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCTTCGTGA 1515 0.4838 MWDLNDSPDQRKDYESEGCSSLKEGDDDKGKRVGSVSNSSSSAVVIEDGSEEEDGDRGGSRTFKKKSSKIFGFSVTHHDSDRPPVTVTRQFFPVEDSDVALPSGGGGTSNSFPRAHWVGVKFCQSETLGAGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDKELNSESSGVAADHNLDLSLGNSSSKHSSSQALGNQPPNSSTDQHMALESNWRNGGSKPKVHLVNILPKPCGRSNMEAYARDGQGESEALRLLSQTRLHSPPTNEMHRYGPYRSPAEPPQMPQNFVNLHPPNFHVSSSSNGGRIGSDLSLSMSEQQWQPGPPHLLATAAASSGFPPQIRPSQGWLQKNGFHTLMRPS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0894 504 Gene3D AP2/ERF domain 152 211 IPR036955 GO:0003700|GO:0006355
Apr7g0894 504 Gene3D AP2/ERF domain 244 303 IPR036955 GO:0003700|GO:0006355
Apr7g0894 504 MobiDBLite consensus disorder prediction 1 33 - -
Apr7g0894 504 ProSiteProfiles AP2/ERF domain profile. 153 209 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 Pfam AP2 domain 153 201 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 Pfam AP2 domain 244 293 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 502 - -
Apr7g0894 504 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 502 - -
Apr7g0894 504 SMART rav1_2 245 308 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 SMART rav1_2 153 215 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 MobiDBLite consensus disorder prediction 485 504 - -
Apr7g0894 504 MobiDBLite consensus disorder prediction 133 153 - -
Apr7g0894 504 MobiDBLite consensus disorder prediction 322 352 - -
Apr7g0894 504 CDD AP2 244 304 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 MobiDBLite consensus disorder prediction 1 63 - -
Apr7g0894 504 SUPERFAMILY DNA-binding domain 152 210 IPR016177 GO:0003677
Apr7g0894 504 PRINTS Ethylene responsive element binding protein signature 246 257 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 PRINTS Ethylene responsive element binding protein signature 284 304 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 ProSiteProfiles AP2/ERF domain profile. 245 302 IPR001471 GO:0003700|GO:0006355
Apr7g0894 504 SUPERFAMILY DNA-binding domain 244 304 IPR016177 GO:0003677
Apr7g0894 504 CDD AP2 153 210 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0894 Apr-Chr7 15965127 15969564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0894 1 336 AP2-EREBP Transcription Factor Family AT4G36920 70.621 4.04e-140 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Apr7g0894 AP2 3.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0894 K09284 - gmx:100786333 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0894 7 15965127 15969564 Apr7g0894 7 15965127 15969564 ECH
Apr7g0894 7 15965127 15969564 Apr3g0124 3 2172451 2176033 PCT