Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0886 ATGGCCGTGGAACTCATGATGGGGTATAGGAACGACAGTTTCGCTGAAGAGAATGCGGTTCAAGAAGCAGCGTCTGGGTTAGAGAGCGTGGAGAAGCTCATAAGGTTACTATCACAGACTCAGCAACAACAATACCAATCTCCCATGGAAATTGAAACTGACTGCAGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAACGTGATTTCGCTTCTGGGTCGAACTAGAACCGGTCACGCTCGTTTCAGAAGAGCCCCTTTACCTCCTCCTACCCCTCAAACTCAACAACCATCTTCCGAACCTAGAGTCTATCATGCTACGCCGTTGCAGCAGATCCCTCCCCCAACTCTTCAACCTTTCATCCTCAAAAACGGGCTCACTGAGACAAAGGACTCTTCCAAGACCATTTATTTCTCACATTCCTCTGCCGCTAGTTCTTTCGTTTCGTCCCTCACCGGCGACACTGACGTTAAACAACCGTGCTTGTCGTCGCCGGCGACGGCTTTTCAGATCACGAATCTTTCTCAGGTATCCTCCGCTGGAAAGCCTCCTCTTTTTTCGTCTTCGACGAAGAGGAAGTGTAGCTCTGAAAACTTGGGTTCTGCTAAGTGTGGTAGTTCCTCTGGTCGCTGCCATTGCTCGAAGAAAAGCAGAAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCGGCAATAAGCTTGAAAATGGCTGACATTCCTCCTGATGATTATTCTTGGAGGAAGTATGGACAGAAACCTATTAAAGGATCCCCCCATCCAAGGGGTTACTACAAGTGCAGCAGCGTTAGAGGGTGTCCAGCGCGGAAACACGTAGAACGGGCTTTGGATGATCCATCTATGCTGGTGGTTACCTATGAAGGAGATCACAATCACACCCTCTCTGCGGCCGAAGCTACAAATCTTATCCTAGAATCCTCTTAA 942 0.4915 MAVELMMGYRNDSFAEENAVQEAASGLESVEKLIRLLSQTQQQQYQSPMEIETDCRAVADVAVSKFKNVISLLGRTRTGHARFRRAPLPPPTPQTQQPSSEPRVYHATPLQQIPPPTLQPFILKNGLTETKDSSKTIYFSHSSAASSFVSSLTGDTDVKQPCLSSPATAFQITNLSQVSSAGKPPLFSSSTKRKCSSENLGSAKCGSSSGRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHTLSAAEATNLILESS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0886 313 SUPERFAMILY WRKY DNA-binding domain 237 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g0886 313 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 13 313 - -
Apr7g0886 313 Pfam Plant zinc cluster domain 192 238 IPR018872 -
Apr7g0886 313 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g0886 313 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g0886 313 Pfam WRKY DNA -binding domain 242 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g0886 313 MobiDBLite consensus disorder prediction 80 103 - -
Apr7g0886 313 Gene3D WRKY domain 226 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g0886 313 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 313 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0886 Apr-Chr7 15874523 15876606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0886 1 298 WRKY Transcription Factor Family AT2G24570 46.440 2.65e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr7g0886 WRKY 7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0886 - - gmx:100804089 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0886 7 15874523 15876606 Apr7g0886 7 15874523 15876606 ECH
Apr7g0886 7 15874523 15876606 Apr9g2537 9 32548395 32549858 PCT
Apr3g0113 3 1964250 1966981 Apr7g0886 7 15874523 15876606 PCT