Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0882 ATGGAACCAGCATCTACTGATTCTTCAACTCAACCTACTCCTTCAGTTTCTAGTACTGAAGAACATCACTCAACCAAAGTATCTGGACAAATTAACAGTGTAATTGATTCACCATCTTCGTTACCCGCTTCTGGCATATCATCATGGGCACGATTGAAAATCCCACAGGCCTTTGGGCTTGGAGCAGCACAACAGGACTCACAGACTGAAAACAATAGCATATCAGCTTTCGCTCGCCTCACTGGTGGGCTTGGATTGCGAATGCCGTCAACTGGAACTGTTCCAGCCAACTCTGGAGCTGAGCAACCTAATTTAATTGAATCGTTCACCAAAGGGTTGGTGGACTCTTCCAAGAGTGCAGTAAAGGCAGTGCAGGTTAAAGCACGCCATATGGTCTCTCAGAATAAACGCAGATACCAGGAAGATGGATTTGATTTGGATATGACATACATCACTGAAAATATAATTGCTATGGGATTTCCAGGTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGTTCTATCGCAATCACATGGAAGAAGTGATCAGGTTTTTTGAGACACATCACAAGGGAAAGTACAAAGTATACAATCTTTGTTCTGAAAGGTTATACGATGGATCACTATTCCAAGGGAAGGTTGCAACTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCGAAGTGCACATTCATGGTTGAAGGAGGATATTCAAAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGAAGGACTGGACTGATGATATGTAGTCTTCTTCTATTTCTTAAGGTCTTCCCAACTGCAGAGGAAGCAATTGGTTACTTTAACCAGAAAAGATGCGTAGATGGAAAGGCTCTAGTTCTCCCTAGTCAGATTAGATATGTCAAATACTTTGAACGGACTTTAACAAACTTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACCAATGCCCTTATTGGGTTAGGCCATCTATTACAATTTCTGATCATAAAGGAATTCTTTTTTCCACAAGAAATCATCTCAAAACGAAGGAACTAATGCCTGAAGATTTCTGGATCAGTGCGCGAAAGAAAGGAATTGTGGTCTTCGCACTGCCGGGAGAGCTCGGTTTAACAGAGTTGATTGGGGACTTCAAAATTCATTTTCATGATCGTCAGGGAGATTTCTACTGTTGGATGAATACAACAATGATAGAAAATCGAAAATTTTTAGATGCTTCAGATTTTGATGGTTTTGACAAGAGAAAGATCCCAGCTCCAGGATTCCAGGTGGAAGTTGTGATGATAGACTACAATGGCACCCTTCCTGCACGGACAAAAGCCAATCCTACCAGCAAAGGATCTGATGGAATTACAAGCAATGTCCAAGCCAATGCAAATTCTACTACATCTAATTCAAGTCCGACTGAAGTCGCTAAGAACGAAGATGATGATGTATTCTCAGATAGTGATGAAGAGAAGACCCGGGAAACACAAAGCAAGAGTGCAACTGACTACAAATTTATGGCACCTCATCAAGTATCTGAAACCACTACAGACAACGTAGGGATGCTGGCTCATACAACAGATCGATTGTCACTTCAGCACGAGGAACATACACAAAACAATGCTTCCAAAGAATCAACTACAGAAAAAGTTCATAAAATTCAGGCAGGCACTAAAAACACAATCATGGAATCTGGAGGAGCAAGTGAATTCAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCATTTGGAGATGAAGATTTTGAAAGTGATTGA 1818 0.4125 MEPASTDSSTQPTPSVSSTEEHHSTKVSGQINSVIDSPSSLPASGISSWARLKIPQAFGLGAAQQDSQTENNSISAFARLTGGLGLRMPSTGTVPANSGAEQPNLIESFTKGLVDSSKSAVKAVQVKARHMVSQNKRRYQEDGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIRFFETHHKGKYKVYNLCSERLYDGSLFQGKVATFPFSDHNCPPIQLIASFCRSAHSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLFLKVFPTAEEAIGYFNQKRCVDGKALVLPSQIRYVKYFERTLTNFNGEVQPGRRCMLRGFRLHQCPYWVRPSITISDHKGILFSTRNHLKTKELMPEDFWISARKKGIVVFALPGELGLTELIGDFKIHFHDRQGDFYCWMNTTMIENRKFLDASDFDGFDKRKIPAPGFQVEVVMIDYNGTLPARTKANPTSKGSDGITSNVQANANSTTSNSSPTEVAKNEDDDVFSDSDEEKTRETQSKSATDYKFMAPHQVSETTTDNVGMLAHTTDRLSLQHEEHTQNNASKESTTEKVHKIQAGTKNTIMESGGASEFKAIAADASVFSFGDEDFESD* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0882 605 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 12 605 - -
Apr7g0882 605 MobiDBLite consensus disorder prediction 458 489 - -
Apr7g0882 605 Pfam Protein-tyrosine phosphatase 223 273 IPR000242 GO:0004725|GO:0006470
Apr7g0882 605 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 251 290 IPR000387 GO:0016311|GO:0016791
Apr7g0882 605 ProSiteProfiles C2 tensin-type domain profile. 323 450 IPR014020 -
Apr7g0882 605 MobiDBLite consensus disorder prediction 458 517 - -
Apr7g0882 605 MobiDBLite consensus disorder prediction 1 41 - -
Apr7g0882 605 ProSitePatterns Tyrosine specific protein phosphatases active site. 253 263 IPR016130 GO:0016311|GO:0016791
Apr7g0882 605 CDD PTP_PTEN 147 311 IPR045101 GO:0016791
Apr7g0882 605 Gene3D Protein tyrosine phosphatase superfamily 122 319 IPR029021 -
Apr7g0882 605 ProSiteProfiles Phosphatase tensin-type domain profile. 137 316 IPR029023 -
Apr7g0882 605 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 12 605 - -
Apr7g0882 605 SMART PTEN_C2_2 321 449 IPR014020 -
Apr7g0882 605 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 142 313 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0882 Apr-Chr7 15846303 15853000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0882 36 605 Protein tyrosine phosphatase (PTP) family AT3G19420 61.695 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0882 K01110 - gmx:100801622 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0882 7 15846303 15853000 Apr7g0882 7 15846303 15853000 ECH
Apr7g0882 7 15846303 15853000 Apr8g2469 8 34698471 34705536 PCT