LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g0873	ATGGAAGACATCCTAATCAACGTCCTTTGCCTCTTCCTTTTTCTCACCACTTTGAAGCTATTATTCTTCAGAAAAAGATCCAAAAACCCACCACCAAGCCCACCTTCTCTTCCAATAGTTGGGAACCTCCATCAACTGAAACAACCAATTTATCGTACCTTATACGACCTGTCACAAAAATATGGTCCTATATTTTCCCTCCAATTTGGGTCTCAACCCGTGCTTGTCGTTTCATCTTCGTTCGCTGCTGAAGAATGTTTCACCAAAAACGACATCATTTTTGCGAACCGTTTCCAATCTATAAAGACCAAGTATCTTGGCTTTAACCATACCATTATCACAGCATCATCATATGGTGACCACTGGCGCAACTTACGTCGTATTAGCTCAATTGAGATTCTCTCTAATCACCGTCTTAACTCCTTTTTGGGACTGCGAGAGGACGAGATCATGAAGTTGCTTCGAAAGCTAGCTAAGGCCTCTAATAAAGACTTCACAAAAGTTGAGCTTAAGTCCATGTTTGCGGATCTAACGTTTAACACTATCATGAGAATGGTGTGTGGCAAACGCTACTATGGCGAGGAATATGATGGGACCAACGCTGAAGAGGCTAGGAAGTTTAGAGACATCATGAATGAGATGGCCCAGTTCGGGTTAGGGTCGAACCTCGGAGATTTTGTGCCCGTTTTCAGATGGTTCGAATTTCGGAGTCACAAGAAGTTACGAAAAGTTGGGGAGAAGCTAGACTCGCTATTTCAAGGACTCATTGATGAACAAAGGAATAACAAGGATAATTCAAATACCAATACCATGATAAGCCATTTGCTTTCCTTTCAAGAGTCACAACCTGAGTATTACACTGACCAAATTATCAAGGGTCTAATTATGGCATTAATTGTGGCTGGATCAGAAACTACCGCTATAACATTAGAATGGGCGATGTCCAATTTGTTGAACCATCCAGAGGTGTTGGAGAAAGCGAGAATTGAATTGGATGCTCAAGTTGGACAAGAGCGTTTGATGGAGGAAGCAGAAGTTGCCAAGTTGCAATACCTTCAGAACATTATCTCCGAGACTCTAAGATTGCATCCACCAGTGCCAATGCTGCTGCCTCATTACTCCTCCGAAGACTGCACTGTGGGAGGTTATGACGTGCCACGTAACACCATGTTAATGGTGAATGCTTGGGCCATCCACAGGGACCCAGAGTTGTGGACTGACCCAGCAAGCTTTAAGCCCGAGAGGTTTCAGAATGGGCCAGATAACGCCCATAACCTCATCCCTTTTGGGTTGGGAAGAAGGGCGTGTCCTGGGGCAGGCATGGCCCAAAGAACTGTAGGCTTAACTTTAGGCACGCTGATTCAATGCTTTGAGTGGAAAAGGATCGGTGAAGAAGAAGTTGACATGGGCGAAGGACGTGGAACTCTGGTGCCCAAGGCCATTCCATTGGAGGCCCAATGCAAGGCGCGTCCAATCATTAGCAATATTTTCTCTGATCCGTAG	1503	0.4478	MEDILINVLCLFLFLTTLKLLFFRKRSKNPPPSPPSLPIVGNLHQLKQPIYRTLYDLSQKYGPIFSLQFGSQPVLVVSSSFAAEECFTKNDIIFANRFQSIKTKYLGFNHTIITASSYGDHWRNLRRISSIEILSNHRLNSFLGLREDEIMKLLRKLAKASNKDFTKVELKSMFADLTFNTIMRMVCGKRYYGEEYDGTNAEEARKFRDIMNEMAQFGLGSNLGDFVPVFRWFEFRSHKKLRKVGEKLDSLFQGLIDEQRNNKDNSNTNTMISHLLSFQESQPEYYTDQIIKGLIMALIVAGSETTAITLEWAMSNLLNHPEVLEKARIELDAQVGQERLMEEAEVAKLQYLQNIISETLRLHPPVPMLLPHYSSEDCTVGGYDVPRNTMLMVNAWAIHRDPELWTDPASFKPERFQNGPDNAHNLIPFGLGRRACPGAGMAQRTVGLTLGTLIQCFEWKRIGEEEVDMGEGRGTLVPKAIPLEAQCKARPIISNIFSDP*	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g0873	500	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	8	494	-	-
	Apr7g0873	500	Gene3D	Cytochrome P450	23	494	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	58	77	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	177	195	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	290	307	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	310	336	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	353	371	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	394	418	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	426	436	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	E-class P450 group I signature	436	459	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	8	494	-	-
	Apr7g0873	500	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	429	438	IPR017972	GO:0005506\|GO:0016705
	Apr7g0873	500	Pfam	Cytochrome P450	31	471	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	P450 superfamily signature	301	318	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	P450 superfamily signature	354	365	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	P450 superfamily signature	427	436	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	PRINTS	P450 superfamily signature	436	447	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Apr7g0873	500	SUPERFAMILY	Cytochrome P450	31	490	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr7g0873	Apr-Chr7	15775999	15777743	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr7g0873	11	499	Cytochrome P450	AT4G37370	54.767	0.0	563

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr7g0873	K13260		-	gmx:100804509	789.645

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr7g0873	7	15775999	15777743	Apr7g0873	7	15775999	15777743	ECH