Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0863 ATGTTGGAGCTGTGCCGCAGGCAACTTGAGATGTGCTTTGGTGGTGAAGGCAACGACGATGATCTCCTCTGGCACAACGAGTCAAAGCCCCATGCTTCAAGGGACTATTCAATTGCAGTGGTTCAAGCCAATTCCTCCTTGGAAGACCAAGCCCAAGTCTTTACCTCTCCCTCCGCAACCTATGTTGGCGTATACGACGGCCACGGTGGACCCGAAGCTTCGCGTTTCATCACCAACCATCTTTTCAACTTCCTTAGCAAGTTTGCGACAGAGGAAGGTGGTTTGTCGGAGGAAGTGATAAAGAAGGCTTTCGAGGCAACTGAAGAGGCGTTTTTGCGTTTAGTGAGGCAATCGTGGATTGCACGGCCACAGATTGCTTCAGTGGGTTCGTGTTGCCTTCTGGGAGCGATTTCGAATAACGTTCTTTACGTTGCTAATTTGGGGGATTCGAGAGCGGTTTTGGGTCGTAAAGCATTGAAAGGAAAGGTGAATTGTGGTCCTGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAAGAGGTCAGAAAGGAGGTTGAGGCTCTTCACCCTGACGATGCACACATTGTGGTTTGCACTCGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCCATTGGAGATGTTTACCTAAAAAAACCAGAGTTTGACAACAATCCTCTGTTCCAACAATTTGTATGTCCGCTATCTTTGAAGAGACCTGTAATGACAGCAGAACCATCGATATTGACGCGAAAATTGAAGGCAGAAGATCTGTTTTTGATCTTTGCATCAGACGGACTTTGGGAGCATTTAACTGATGAAGCAGCTGTTGAAATAATATTCAGAAGTCCCAGAACAGGAATAGCAAAACGGTTGGTGAGAGCTGCATTGGAAGAGGCTGCAAAGAAAAGAGAAATGAGATATGAGGATTTAAAGAAAGTTGAGAAAGGTCTAAGGCGTCATTTTCATGATGATATTACAGTGATCGTTCTATACCTGGATCATTCACAAGAATCTCTGAAGGGGAGGTCAAGCCATCAAGGAGTCCATGGTTGCATTGATACTCCTGTCGATGTCTTCTCGCTGAAATCAGATGAAACTGACCGGTGA 1128 0.4601 MLELCRRQLEMCFGGEGNDDDLLWHNESKPHASRDYSIAVVQANSSLEDQAQVFTSPSATYVGVYDGHGGPEASRFITNHLFNFLSKFATEEGGLSEEVIKKAFEATEEAFLRLVRQSWIARPQIASVGSCCLLGAISNNVLYVANLGDSRAVLGRKALKGKVNCGPVVAERLSTDHNVGVEEVRKEVEALHPDDAHIVVCTRGVWRIKGIIQVSRSIGDVYLKKPEFDNNPLFQQFVCPLSLKRPVMTAEPSILTRKLKAEDLFLIFASDGLWEHLTDEAAVEIIFRSPRTGIAKRLVRAALEEAAKKREMRYEDLKKVEKGLRRHFHDDITVIVLYLDHSQESLKGRSSHQGVHGCIDTPVDVFSLKSDETDR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0863 375 Pfam Protein phosphatase 2C 57 308 IPR001932 -
Apr7g0863 375 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Apr7g0863 375 ProSiteProfiles PPM-type phosphatase domain profile. 35 339 IPR001932 -
Apr7g0863 375 SMART PP2C_4 25 337 IPR001932 -
Apr7g0863 375 CDD PP2Cc 42 339 IPR001932 -
Apr7g0863 375 PANTHER ALPHABET, ISOFORM E-RELATED 3 374 - -
Apr7g0863 375 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 374 - -
Apr7g0863 375 Coils Coil 300 320 - -
Apr7g0863 375 SUPERFAMILY PP2C-like 39 341 IPR036457 -
Apr7g0863 375 Gene3D - 18 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0863 Apr-Chr7 15638752 15642287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0863 17 348 PP2C-type Phosphatase Gene Family AT3G51370 54.839 2.03e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0863 - K01102 gmx:100802394 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0863 7 15638752 15642287 Apr7g0863 7 15638752 15642287 ECH
Apr7g0863 7 15638752 15642287 Apr8g2430 8 34439387 34442183 PCT