Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0846 ATGACGCAATTCACACCACCTTTGCACCAAAGCCCACACTTTCCAAACCCTACAATGAACAAAAATCAAATTCCTCGGACTAGGCCCTGGCCTGGATTCCCAACTTCTAAGTCCCTAGGTACCAGCTTCGGCGACGCCAATTGCATGGAACAGTTACTCGTTCACTGTGCCAACGCCATCGAAAGCAACGACGTAACTCTTGCCCAACAAATCCTTTGGGTCCTCAACAACATAACACCCCCTGATGGTGATTCCAATCAACGCCTTGCTGGTAGTTTTCTTCGTGCCCTCACCGCACGTGCGGCCAAAACGGGAAGCTGTAAAATGCTAGAAGCTGTTGCAGACGCTCATAGCATTAACGACCTCGCTATTCACACCCACAAATTCTCCATCATTGAGTTAGCTAACTTCGTTGACTTGACCCCTTGGCATCGCTTCGGTTTCACAGCTGCTAATGCTGCCATTCTAGAAGCTACTGAAGGATTCTCCGTTATCCATATCGTTGACTTAAGCTTAACGCATTGCATGCAAATTCCCACGCTCATTGACGCCATTGCTAACCGCCACGAGGTTCCTCCTCTAATCAAACTCACCGTTGCTGGTTCCGCTTGTAGAGACGTTCCTCCTATGTTGGACCTTTCCTACGACGAGTTGGGTACCAAGTTGGTCAACTTCGCAAGGTCAAAGAATGTTGTTATGGAATTCAGAGTGGTTTCTTCTAGTTATGAAGACGGATTCGCGGCTTTGATTCAACACTTGCGGGTACAACATTTAGTGTATGAAGCCGAAGGTCACCATCCAACAGAAGCTTTGGTCATAAACTGTCATATGATGCTTCATTACATTCCTGATGAAACCGTTGCTTTATCTTCGATTTCAGATTCTAACTCTTATGTTTATAGCTCTTCTTCTGCTTCGTCCTTGAGATCAATGTTCCTCAAAGCCTTGAGGACTTTAGACCCTACCATTGTCGTTTTGGTGGATGAAGATGCGGATTTAACATCTAATAATTTGGTGTCCAGACTTAGGTCTGCGTTTAATTATCTATGGATACCCTATGATACGGTGGACACGTTTCTTCCACGAGGGAGTAAGCAAAGGCAGTGGTATGAAGCGGATATATGCTGGAAGATTGAGAATGTGATAGCACATGAAGGGCTTCAGAGGGTTGAGCGAGTAGAGCCTAAAAGCAGGTGGGAGCAACGAATGAGAAATGCAAACTTCCATGGGATCAGTTTCAGTGAGGATTCTGTTTCAGAGGTTAAAGGCATGCTCGATGAACATGCAGCTGGATGGGGATTAAAGAGGGAAGATGAACATCTGGTGCTCACGTGGAAAGGGCACAATGTCATCTTTGCCTCTGCTTGGCTTCCTGCTTGA 1380 0.4609 MTQFTPPLHQSPHFPNPTMNKNQIPRTRPWPGFPTSKSLGTSFGDANCMEQLLVHCANAIESNDVTLAQQILWVLNNITPPDGDSNQRLAGSFLRALTARAAKTGSCKMLEAVADAHSINDLAIHTHKFSIIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIANRHEVPPLIKLTVAGSACRDVPPMLDLSYDELGTKLVNFARSKNVVMEFRVVSSSYEDGFAALIQHLRVQHLVYEAEGHHPTEALVINCHMMLHYIPDETVALSSISDSNSYVYSSSSASSLRSMFLKALRTLDPTIVVLVDEDADLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERVEPKSRWEQRMRNANFHGISFSEDSVSEVKGMLDEHAAGWGLKREDEHLVLTWKGHNVIFASAWLPA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0846 459 PANTHER SCARECROW-LIKE PROTEIN 32 23 457 - -
Apr7g0846 459 MobiDBLite consensus disorder prediction 1 25 - -
Apr7g0846 459 MobiDBLite consensus disorder prediction 1 31 - -
Apr7g0846 459 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 457 IPR005202 -
Apr7g0846 459 Pfam GRAS domain family 49 456 IPR005202 -
Apr7g0846 459 ProSiteProfiles GRAS family profile. 40 457 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0846 Apr-Chr7 15505820 15507199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0846 33 458 GRAS Transcription Factor Family AT3G49950 58.372 1.71e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr7g0846 GRAS 2.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0846 - - adu:107487668 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0846 7 15505820 15507199 Apr7g0846 7 15505820 15507199 ECH