Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0843 ATGGCCATTAGGCCCTTCCAATTCCAATCGACCTTTTCGCGCGATAGATTACTCTCTCTCTTCAGCACTTGCCATTCCCTTTCCTCCAACAACTTTCCGTCATCTTCCCTCCTCCGTCGCTTCGCTGCGTCCGCGGCGGCTTCGCTCCGTCAGCACTCTCATCATCCGGCGCTGCCGTCACCTCCACCTAACACCCTGGCTCACAAGATTGCAAAAGCCACTCGCCGCCCTGGCGCCACCTCTAAGGCCAGAGTCTATGCCGATATCAACGTTGTTCGCCCCAAGGAATATTGGGACTACGAGTCCCTTTCCGTCCAATGGGGGGAGCAAGATGATTATGAGGTTGTGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAGGGTGTTCACTGCACGGATAATGAAAAATGTGTCATCAAGATCCTCAAACCCGTGAAGAAGAAGAAGGCACTGGATTACTGCCATTCACAAGGAATCATGCATCGAGATGTAAAGCCACATAACGTAATGATTGACCATGAGCAACGTAGGCTTCGCCTTATAGATTGGGGACTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGCGTTGCCTCAAGATATTTCAAAGGCCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGTCTCTCGGTTGTATGTTTGCTGGAATGATATTTCGTAAGGAGCCATTCTTTTATGGACAGGATAACTATGATCAACTAGTCAAAATAGCCAAGGTACTTGGAACAGATGAATTAAAAGCATATCTGCACAAGTATCGCATAGAATTGGACCCGCATCTTGCAGTGCTTGTTGGAAAGCATGGCCGGAAGCCATGGGAAAAGTTCATTAATGCAGATAATCAACACTTGGCTGTTCCTGAGGCTGTTGACTTTGTTGATAAGTTACTGCAGTACGATCACCAAGAACGGCCCACTGCAAAAGAAGCTATGGCCCACCCTTACTTCAATCCAGTCAGAAATGCAGAAAGCAGCAGAAGTCATACACGACGTTGA 1047 0.4728 MAIRPFQFQSTFSRDRLLSLFSTCHSLSSNNFPSSSLLRRFAASAAASLRQHSHHPALPSPPPNTLAHKIAKATRRPGATSKARVYADINVVRPKEYWDYESLSVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKALDYCHSQGIMHRDVKPHNVMIDHEQRRLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGQDNYDQLVKIAKVLGTDELKAYLHKYRIELDPHLAVLVGKHGRKPWEKFINADNQHLAVPEAVDFVDKLLQYDHQERPTAKEAMAHPYFNPVRNAESSRSHTRR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0843 348 Pfam Protein kinase domain 151 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0843 348 CDD STKc_CK2_alpha 94 333 IPR045216 GO:0004674|GO:0006468
Apr7g0843 348 Gene3D Transferase(Phosphotransferase) domain 1 152 333 - -
Apr7g0843 348 Gene3D Phosphorylase Kinase; domain 1 113 151 - -
Apr7g0843 348 MobiDBLite consensus disorder prediction 327 348 - -
Apr7g0843 348 PANTHER BNAA04G13490D PROTEIN 151 339 - -
Apr7g0843 348 PANTHER BNAA04G13490D PROTEIN 63 151 - -
Apr7g0843 348 SMART serkin_6 113 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0843 348 SUPERFAMILY Protein kinase-like (PK-like) 107 337 IPR011009 -
Apr7g0843 348 PANTHER CASEIN KINASE II SUBUNIT ALPHA 151 339 IPR045216 GO:0004674|GO:0006468
Apr7g0843 348 PANTHER CASEIN KINASE II SUBUNIT ALPHA 63 151 IPR045216 GO:0004674|GO:0006468
Apr7g0843 348 ProSiteProfiles Protein kinase domain profile. 21 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0843 348 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Apr7g0843 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0843 Apr-Chr7 15464383 15471249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0843 111 340 Core Cell Cycle Gene Families AT2G38620 28.016 1.89e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Apr7g0843 Pkinase 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0843 K03097 - vvi:100262741 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0843 7 15464383 15471249 Apr7g0843 7 15464383 15471249 ECH