Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0838 ATGACAAATACAGAGTGGAACGCTTCAAATTTCGATCAAGCAGAGAAGCATAAAGTGATGGCTAACGAGAAGGGCAATTGTTGTAATTCTCTTCGGAATACTAAGAAATTCACTCCGGCACCACCTCCTATGCCCCATTCAGCAGCAACCGGTTGTCCATGCGAGTGTATGGCACCGAATAATTCAGCACCAACATGGCGCAGCACCAATGTCTCTTCAACAACAAAAGATATGTGGGAGCGTCTTTTTGATCAAGGTTATAATGCAGATGTTTGCATTAATACTGATAACGGTGGCGTTGTTTATGCTCATTCTACTATTCTTGCTATGGCTTCTCCCGTATTGAGAGGTATGCTGAAGCAAGCAAATCGTCATCGTCGATGGCGAACAATCTCAATCCTTGGGGTTCCGCATGATGCAGTTCGTGTTTTTATTCGATTCTTGTACTCATCGAGTTATGAGAAAGAAGAAATGGATGAAATGGTATTACAATTGATGGTGCTGTCACATGCATACATGGTTCCTCACTTGAAGCGCGAATGTGAACAGAAGCTAGAATTGGATTTACTCAACATAGATAATGTAGTTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCACGGCTCAGCCTTATTTGTCACCGTAAAATGCTAAAAAATTTTAAAGCTGTTTCAGAGTCTGAAGGATGGAAAGCAATGAAGCATAGCCACCCAGCTTTAGAAAAGGAAATTCTGGAATCAGTGATTGATGAAGAAAATAGTAAAAAGGATCGGATGAGAAAAATCAAAGAAAGAAGAATCTATATGCAATTATACGAGGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTAGAACTATTGGCCCCCATGATAAAGACTTCAAATCAAACCAACCGTGTAAGTATGAAGCATGCAAGGGGCTAGAATTGCTTGTTCGTCATTTTGCTGGATGTAAATTGAGAGTTCCTGGAGGTTGTGTTCATTGCAAGAGAATGTGGCAACTATTGGAGCTACACTCTCGACTATGTGCTGATCCAGATTACTGTAGAGTTCCTTTGTGCAGGAACTTTAAGCAGAGAATATCAAGACAAAGCAAGAAAGACGAAATTAGGTGGAAAATATTGGTTGAAAAGATATTGAGAACAAGAGGAATTGGAATAGCATCGTGCTTTCGGCTGCAATGA 1194 0.4037 MTNTEWNASNFDQAEKHKVMANEKGNCCNSLRNTKKFTPAPPPMPHSAATGCPCECMAPNNSAPTWRSTNVSSTTKDMWERLFDQGYNADVCINTDNGGVVYAHSTILAMASPVLRGMLKQANRHRRWRTISILGVPHDAVRVFIRFLYSSSYEKEEMDEMVLQLMVLSHAYMVPHLKRECEQKLELDLLNIDNVVDVFQLALLCDAPRLSLICHRKMLKNFKAVSESEGWKAMKHSHPALEKEILESVIDEENSKKDRMRKIKERRIYMQLYEAMEALVHICRDGCRTIGPHDKDFKSNQPCKYEACKGLELLVRHFAGCKLRVPGGCVHCKRMWQLLELHSRLCADPDYCRVPLCRNFKQRISRQSKKDEIRWKILVEKILRTRGIGIASCFRLQ* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0838 397 SMART BTB_4 89 189 IPR000210 GO:0005515
Apr7g0838 397 SMART TAZ_2 266 358 IPR000197 -
Apr7g0838 397 ProSiteProfiles Zinc finger TAZ-type profile. 263 360 IPR000197 -
Apr7g0838 397 CDD BACK 191 248 - -
Apr7g0838 397 Pfam TAZ zinc finger 273 357 IPR000197 -
Apr7g0838 397 Gene3D TAZ domain 265 385 IPR035898 -
Apr7g0838 397 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 29 395 IPR044513 -
Apr7g0838 397 Pfam BTB/POZ domain 81 186 IPR000210 GO:0005515
Apr7g0838 397 SUPERFAMILY TAZ domain 266 366 IPR035898 -
Apr7g0838 397 Gene3D - 190 264 - -
Apr7g0838 397 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 29 395 - -
Apr7g0838 397 SUPERFAMILY POZ domain 66 185 IPR011333 -
Apr7g0838 397 Gene3D Potassium Channel Kv1.1; Chain A 58 189 IPR011333 -
Apr7g0838 397 ProSiteProfiles BTB domain profile. 89 157 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0838 Apr-Chr7 15379645 15384413 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Apr7g0838 BTB 5.6e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0838 - - gmx:100807461 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0838 7 15379645 15384413 Apr7g0838 7 15379645 15384413 ECH