Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0826 ATGGATACGTTGTTTAGGGTAGTGAGTTTTCAACACCAACCCGATCAATCCCTCAACTCCACCACCAGTAGCAGCTCTCGATCCTCAAGACAAAACTATCACTACCCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTATCCTCGTCTTCTTCCAAACACTACTATCCTTATCAACCCCACCACCCTTCCACCACCACTACCACACCCACTACAACAACAACAACAACTAACACCCCCACACCCACCCCCACCACCACTGACTTCAACTTCAACTTCGAATTCTCCGGCAAGTGGGCCCACGACATCCTCCTAGAAACCGCGCGAGCCATTGCCAACAAGAACACCACTCGCATCCAACAACTCATGTGGATGCTAAACGAGCTTGGTTCCCCTTATGGTGACACCGATGAGAAACTCGCTTCCTACTTCCTCCAAGCCTTCTTCAGCCGCATCACCGAAGCTGGGGACCGAACCTACAGAACCTTGAACTCCACTTCGGAGAAAACATGCTCCTTCGAATCAACGAGAAAGACGATGTTGAAGTTTCAAGAGGTGAGTCCCTGGACAACCTTCGGTCACGTGGCTTCCAATGGTGCCATCTTGGAAGCCTTGGAAGGCGAGCCAAAGTTACACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCCACTCTCTTCGAAGCCTTGGCCACTCGAAACGACGACACTCCACACCTCCGTTTAACCTCCGTCGTCACCACCCAACCCGGCGGCTCCCTCGCCGCCGTACAGAAAATCATGAAGGAAATCGGCACTAGAATGGAGAAATTCGCGAGGCTCATGGTCGTGCCCTTTAAATTCAACGTCGTTCATCATGTTGGTCAACTCTCTGACTTGGATTTCAACGAGTTAAACATCCAAGAAGACGAGGCTTTGGCTATTAACTGTGTCAACGCCTTGCATTCGATCACGGCAGTTGGAAACCACCGTGATGTGTTGATATCCTCGTTGAGAAGGTTGCAACCGAGGATCGTGACGGTGGTGGAAGAGGAAGCTGATTTGAATGTGGGTTTGGAGGGGTTTGAGTTCGTGAAAGGCTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTATTTTGAAGCGTTGGATGAAAGTTTTCCGAGGACGAGCAGCGAGCGTTTGATGCTTGAGAGAGCGGCGGGGAGAGCGGTGGTTGACTTAGTGGCGTGTGCGCCGGTGGAATCAGTGGAGCGGAGGGAGACGGCGGCGCGGTGGTCGCGGCGTATGCATGGTGGAGGGTTCAATACGGTGGCGTTTAGTGAGGAGGTTTGTGATGATGTGAGGGCGTTGTTGAGGAGATATAATAAGGAGGGTTGGTCAATGACACAGTGCCCCGACGCCGGAATATTCTTGTCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCCTTGACGTAG 1464 0.5164 MDTLFRVVSFQHQPDQSLNSTTSSSSRSSRQNYHYPQEDEECFNFFMDEEDLSSSSSKHYYPYQPHHPSTTTTTPTTTTTTTNTPTPTPTTTDFNFNFEFSGKWAHDILLETARAIANKNTTRIQQLMWMLNELGSPYGDTDEKLASYFLQAFFSRITEAGDRTYRTLNSTSEKTCSFESTRKTMLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSVVTTQPGGSLAAVQKIMKEIGTRMEKFARLMVVPFKFNVVHHVGQLSDLDFNELNIQEDEALAINCVNALHSITAVGNHRDVLISSLRRLQPRIVTVVEEEADLNVGLEGFEFVKGFQECLRWFRVYFEALDESFPRTSSERLMLERAAGRAVVDLVACAPVESVERRETAARWSRRMHGGGFNTVAFSEEVCDDVRALLRRYNKEGWSMTQCPDAGIFLSWKDQPVVWASAWRPLT* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0826 487 ProSiteProfiles GRAS family profile. 96 484 IPR005202 -
Apr7g0826 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 484 IPR005202 -
Apr7g0826 487 Pfam GRAS domain family 107 484 IPR005202 -
Apr7g0826 487 PANTHER PROTEIN SHORT-ROOT 1 484 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Apr7g0826 487 MobiDBLite consensus disorder prediction 12 34 - -
Apr7g0826 487 MobiDBLite consensus disorder prediction 56 91 - -
Apr7g0826 487 MobiDBLite consensus disorder prediction 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0826 Apr-Chr7 15289079 15291389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0826 1 485 GRAS Transcription Factor Family AT4G37650 60.561 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr7g0826 GRAS 1.4e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0826 - - gmx:100820459 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0826 7 15289079 15291389 Apr7g0826 7 15289079 15291389 ECH
Apr7g0826 7 15289079 15291389 Apr3g0058 3 967327 969000 PCT