Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0809 ATGCTCTCTGCTCTTTCATCTTCCGACCCTTTGCTTTTAAACCCATTCTCGGCGTTGGACGGTGGTTTCACGCCGTGGGACTGCCCTGACTTTTTTACATTCGAACCCACCAGCCCCAACCCCGTTACTTCTAGTTCAGGTTCGGACGACCCAAACCAAACCCATGCCGAAGAAAAACCAGCCTCAGAGGAGTCGAACCGCGTTGCATCGGTTATGGAGGAGCGAAAACGCAGGCGAATGATATCGAACCGGGAATCGGCACGAAGGTCGCGCATGCGTAAGCAGAGGCACCTAGAGAACTTACGGAACCAGGTGAACCTTTTTAGGATTGAAAACCGGGATCTGAACAACGGGTTGCAGTTCCTCCTTCACTGCTGTAACCGCGTACGAACCGAAAACGATTGGCTCCGGAACGAGCGAACCATGCTCCGCCAAAAATTGTCCGAAATAAATCAAATGTTGGTTTTCCAACAATTGCAACCCTTCTCCTCTGCATGGCCATGCAATATTATCACACCGGAATAA 525 0.5067 MLSALSSSDPLLLNPFSALDGGFTPWDCPDFFTFEPTSPNPVTSSSGSDDPNQTHAEEKPASEESNRVASVMEERKRRRMISNRESARRSRMRKQRHLENLRNQVNLFRIENRDLNNGLQFLLHCCNRVRTENDWLRNERTMLRQKLSEINQMLVFQQLQPFSSAWPCNIITPE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0809 174 Pfam bZIP transcription factor 75 131 IPR004827 GO:0003700|GO:0006355
Apr7g0809 174 MobiDBLite consensus disorder prediction 52 88 - -
Apr7g0809 174 MobiDBLite consensus disorder prediction 36 51 - -
Apr7g0809 174 PANTHER BZIP TRANSCRIPTION FACTOR 26 172 - -
Apr7g0809 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Apr7g0809 174 SUPERFAMILY Leucine zipper domain 75 124 IPR046347 GO:0003700|GO:0006355
Apr7g0809 174 MobiDBLite consensus disorder prediction 34 94 - -
Apr7g0809 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 122 IPR004827 GO:0003700|GO:0006355
Apr7g0809 174 Gene3D - 73 128 - -
Apr7g0809 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Apr7g0809 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Apr7g0809 174 Coils Coil 84 118 - -
Apr7g0809 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0809 Apr-Chr7 15162889 15163450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0809 4 160 bZIP Transcription Factor Family AT2G22850 35.577 1.95e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr7g0809 bZIP_1 2.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0809 - - gmx:102661188 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0809 7 15162889 15163450 Apr3g0042 3 740065 740624 PCT