Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0808 ATGAAGCCCATAGAAAATAGTGATGCCATTAACATTAACAGTCAAAATAATATGTTGGGTTTCTCCCTCTCTCCGCAAATGAATATAGGTGTTCCTTCACACCTTCATCAGACACAGCCTTTAATTGCTGCAGCTGAAACAGTTCCACCGAGCTTTTACCACCATACTATTCTTCATAACTACGGCCTTTACTATGGACTTGAAGGTGAACATGTTGGAATGTGTTCATCCTTGCTGCCTATCATGCCCCTTAAATCCAATGGCTCGCTCTATGGAATAGAAGCTTTGAGTAGATCACAAGCACAAGGTGAACTCCGACTCAAACCTTTGCTATATTCTTGTGTTTTGGTGACAATGCATCTGAGCTTAGATGGTGTGTTTTACAACCAACTCTCATGCCATGGACCAAACAATCTGAATAACCAAATTCACGTACAAGAGAATATCAGCCAGCAGCAATACTCATATTTCCCCGCCATGAGAAACCATAATGTGATTTTAGAAGGGTCCAAGCAACGGCTCTCAAATATAGCTGAGGATGAAATTCCTGGTCTGAATAGCTGGGTCTCAAGGGACTTTCCTATTAGCCATGCACAGGAATCAAACATGACTGTTCCTTTGAAGGATAGTGGAGGCGAATCTGGATCCATTGGATCAATGACATATGGGGATTTACATTCATTGAGTTTGTCCGTGAGTCCTAGCCCACAATCAAGCTGTGTTACTAGTTCACCTACTCTCATTGATTCTGTTGCCATAAATACAAAGAAAAGGGGATCTGAAATGGTGGACCAGGATCAGAAGCGAATGGTTCATAGGAAATCCATAGATACCTTTGGACAAAGAACTTCTCAATATAGAGGTGTAACAAGACATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAGGCAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAGGCTGCAAGAGCTTATGATATGGCCGCACTCAAGTATTGGGGGCCCTCCACTCATACAAATTTCCCATTGGAAAATTATCAAAACCAACTTGAGGAAATGATGAACATGACCAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGGGGGGCCTCCATATACAGAGGAGTGACAAGCAGACACCATCAACATGGAAGGTGGCAAGCTAGAATTGGGAGAGTGGCTGGAAACAAAGATCTATATCTCGGAACATTCAGTACCCAAGAGGAAGCAGCTGAAGCCTACGACATTGCTGCTATAAAATTCCGAGGAGTTAATGCTGTTACTAACTTTGATATAACAAGATATGATGTGGATAAGATTATGGCAAGCAGTAACCTTCTTAGCAGTGAACAAGCTAAACGGAACAAAGAGATGAATGGTGGAACTAGGGACGAGGCTAAGGATAAAAAAAAAGCTTCTGCATGTAAAGACACTCAAGAAGCCATTCCAATGCAGAATCCACCAAGAATTGAGAGTTGTAGAACTCAGTCCTTCTCAATGGCTTTGAATAACATATTTCATCAAGAAGTAGAGGAATCGAGTAACATGGGAACACAATTGTCAAATCCTTCTTCGCTTGTGACAAGCTTGAGTAGCTCAAGAGAAGAGAGCCCAGATAAGACAAGCTTGCCAATGCTCTTTGGAATGCCTGCAACAATGTCCAAATTATTGACTAACGTGGATTCTTGGGATGCATCTTCCCATCTCAGGCCTGCGCTTTCTTTGCCTCAGATGCCAGTGTTTACTACTTGGACCGATGCATGA 1800 0.4244 MKPIENSDAININSQNNMLGFSLSPQMNIGVPSHLHQTQPLIAAAETVPPSFYHHTILHNYGLYYGLEGEHVGMCSSLLPIMPLKSNGSLYGIEALSRSQAQGELRLKPLLYSCVLVTMHLSLDGVFYNQLSCHGPNNLNNQIHVQENISQQQYSYFPAMRNHNVILEGSKQRLSNIAEDEIPGLNSWVSRDFPISHAQESNMTVPLKDSGGESGSIGSMTYGDLHSLSLSVSPSPQSSCVTSSPTLIDSVAINTKKRGSEMVDQDQKRMVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQGGYDMEEKAARAYDMAALKYWGPSTHTNFPLENYQNQLEEMMNMTRQEYVAHLRRKSSGFSRGASIYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVDKIMASSNLLSSEQAKRNKEMNGGTRDEAKDKKKASACKDTQEAIPMQNPPRIESCRTQSFSMALNNIFHQEVEESSNMGTQLSNPSSLVTSLSSSREESPDKTSLPMLFGMPATMSKLLTNVDSWDASSHLRPALSLPQMPVFTTWTDA* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0808 599 ProSiteProfiles AP2/ERF domain profile. 285 348 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 Gene3D AP2/ERF domain 384 445 IPR036955 GO:0003700|GO:0006355
Apr7g0808 599 Gene3D AP2/ERF domain 284 350 IPR036955 GO:0003700|GO:0006355
Apr7g0808 599 SUPERFAMILY DNA-binding domain 284 350 IPR016177 GO:0003677
Apr7g0808 599 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 14 597 - -
Apr7g0808 599 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 597 - -
Apr7g0808 599 MobiDBLite consensus disorder prediction 468 488 - -
Apr7g0808 599 MobiDBLite consensus disorder prediction 525 551 - -
Apr7g0808 599 SMART rav1_2 384 449 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 SMART rav1_2 285 354 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 Pfam AP2 domain 285 340 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 Pfam AP2 domain 385 435 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 MobiDBLite consensus disorder prediction 525 554 - -
Apr7g0808 599 CDD AP2 383 445 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 ProSiteProfiles AP2/ERF domain profile. 384 443 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 PRINTS Ethylene responsive element binding protein signature 286 297 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 PRINTS Ethylene responsive element binding protein signature 425 445 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 MobiDBLite consensus disorder prediction 463 491 - -
Apr7g0808 599 CDD AP2 284 348 IPR001471 GO:0003700|GO:0006355
Apr7g0808 599 SUPERFAMILY DNA-binding domain 383 444 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0808 Apr-Chr7 15145507 15148683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0808 1 599 AP2-EREBP Transcription Factor Family AT4G37750 44.512 3.73e-149 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Apr7g0808 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0808 K09285 - gmx:100812275 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0808 7 15145507 15148683 Apr3g0039 3 694503 698593 PCT