Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0803 ATGGGTCTAGATCAGGACGACAATAACTCCGGCCTTCAGCTTGTTCTAGGGTTATCTCTCACTCCAACGCCAACAAAGCCTTATAATAATTCCTCGAATGAGCCATCTTTAACGTTGAGTCTTTCCGGTGAGAGTAATTACCTGGCCAAACAAGTGACCAGAAACAACAAGGTTTATTGTGAGGACCCTCTTGACTTGTCTAGACAAACTTCACCTCACAGCGTTGTTTCCTCTTTCTCAAGTGGGAGGATGGTTAAAAGGGAGAGGGATTTCAGCTGCGAAGAGGCAGAGGCAGAGGCCGAAGAGAGGCTCTCTTCAAGAGTCAGTGATGAAGACGAAGACGGCTCCAATGCCAGAAAGAAGCTCAGGCTTACCAAAGAACAATCCGCACTGCTAGAGGACAGCTTCAAACAACATAGCACTCTCAATCCTAAACAGAAGCAAGCTTTAGCAAGGCAGTTAAATCTACGGCCTAGACAAGTTGAAGTGTGGTTCCAGAATCGGAGAGCCAGAACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGTTCTTAAAAAAGTGCTGTGAAACGTTGACGGACGAGAATAGGAGGCTGAAGAAGGAGCTGCAAGAGCTGAAGGCACTGAAACTATCACAACCGTTGTACATGCCTATGCCTGCGGCTACACTCACCATGTGCCCCTCTTGCGAGAGGCTAGGTGGCGTCAATGATAGCGGTTCTAATAAGAGCCCCTTCTCCATGGCTCCCAAGACTCACTTCTACAATCCCTTCGCCAATCCTTCTGCAGCATGTTGA 795 0.4843 MGLDQDDNNSGLQLVLGLSLTPTPTKPYNNSSNEPSLTLSLSGESNYLAKQVTRNNKVYCEDPLDLSRQTSPHSVVSSFSSGRMVKRERDFSCEEAEAEAEERLSSRVSDEDEDGSNARKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLSQPLYMPMPAATLTMCPSCERLGGVNDSGSNKSPFSMAPKTHFYNPFANPSAAC* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0803 264 MobiDBLite consensus disorder prediction 1 40 - -
Apr7g0803 264 PANTHER - 8 264 - -
Apr7g0803 264 Gene3D - 112 180 - -
Apr7g0803 264 Pfam Homeodomain 119 173 IPR001356 GO:0003677
Apr7g0803 264 SMART halz 175 218 IPR003106 GO:0006355|GO:0043565
Apr7g0803 264 MobiDBLite consensus disorder prediction 90 123 - -
Apr7g0803 264 SMART HOX_1 117 179 IPR001356 GO:0003677
Apr7g0803 264 Pfam Homeobox associated leucine zipper 175 209 IPR003106 GO:0006355|GO:0043565
Apr7g0803 264 ProSiteProfiles 'Homeobox' domain profile. 115 175 IPR001356 GO:0003677
Apr7g0803 264 ProSitePatterns 'Homeobox' domain signature. 150 173 IPR017970 GO:0000981|GO:0006355
Apr7g0803 264 SUPERFAMILY Homeodomain-like 110 176 IPR009057 -
Apr7g0803 264 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22 8 264 - -
Apr7g0803 264 Coils Coil 181 211 - -
Apr7g0803 264 CDD homeodomain 119 176 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0803 Apr-Chr7 15037446 15039507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0803 1 264 Homeobox Transcription Factor Family AT4G37790 64.261 5.86e-101 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Apr7g0803 Homeodomain 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0803 K09338 - gmx:100784129 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0803 7 15037446 15039507 Apr3g0033 3 580288 581886 PCT