LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g0796	ATGCTACAACTCGGTCTCAATTTCTTTCCCCTTTTAGTACTATGTTTACTAAGCTCAACTCAAGGGGTGTCCCTAGAGAGTCAGTCTCAAATTCTTCTTGAGGTTAAGAACACTCAACTTGAAGACAAAAACAAGAGTCTCAAAAACTGGGGGTACCACAACCCATGTAACTGGACCGGCATTACCTGCGACACACGAAACCAATCAATTGTGTCAATTGACCTATCCGAGATTGGAATTTACGGCGAATTTCCCTTCGGTTTCTGTCGCATTCACACACTCCAAAACCTTTCTCTCGCATCCAACTTTCTCGGCAATGCCATCTCCCCCAACTCTCTGCTCCTCTGTTCCCACCTTCGTCTCTTGAACCTCTCCGACAATTACTTCGTCGGAGACTTACCAGAATTCCCACAAGAGTTCACTCAACTAAGAGAACTAGACCTCTCCAGGAACAACTTCACCGGCGATATTCCGGCGAGTTTTGGGCAGTTTCCGCAACTGAGTGTGCTCCTTTTATTCGGAAACCTTCTCAGCGGAACAATCCCTTCATTTTTAGGCAACCTCAGTGAGTTAACTCGTTTGGAACTCGCTTATAACCCCTTCAAACCAGGACCTTTACCTCCCCAGCTCGGAAACCTTTCAAACTTAGAAACTCTGTTCCTCGCCAATGTAAACCTCGTAGGAGACATCCCACACTCCATTGGAAATCTTATCTCCCTCAAGAACTTAGATTTGTCTCAAAACTCCTTGACAGGTAACATCCCAAGCAGCATTTCGGGTCTGAAAAACGTGCAACAAATTGAGCTTTTCCAAAACCAGCTTTCTGGTGAACTGCCCCAAGAGTTAGGAAACCTCAGCAGTTTAGTTCGTTTGGACCTCTCTCAGAACGGCTTCACCGGAAAACTACCAGACACGATTGCTTCATTGAATCTCTGTTCTCTCAACTTGAACGATAATTTTCTAAATGGAGAAATCCCACTAAGTTTAGCTTCAAACCCGAACCTGCAGCAACTTAAACTCTTTAACAACAGCTTTACTGGGAAACTTCCACAAGATCTTGGGCGAAACTCTGCCGTAGAGGATCTCGATGTCTCAACCAATGACTTCATAGGAGAGTTGCCAAAGTACCTCTGCCAAAGGAACAAGCTTCAGCGTCTCGTCACGTTCGCGAATCGTTTCTCTGGAACGCTCCCTGATCAGTACGCCGAGTGTGATTCCCTACAATATGTCAGAATCCAGAACAACCAACTCTCCGGCCAGGTGCCACCAACGTTTTGGACCCTTCGTGGGCTTCAGTTTCTTGAAATGGCCAACAACAGGTTCCAAGGTTCAGTCTCTGTTTCCATCTCCAATGCCAAGGGACTCACCAAACTCCTCTTATCTGGTAACAGCTTTTCCGGTCAGTTCCCAACGGGAATCTGTGAACTCGATCAGCTCGTGGAGATTGACGTCAGCAAGAACCGGTTCTCCGGTGAAGTTCCCACGTGCATAACCGGATTGAGAAAGTTGCAGAACCTTAGAATGCAGGAAAACACGTTCACCGGCGAAATTCCCAGTAACGTGAGCTCCTGGACTGACATGACGGAGTTGAACTTGTCACATAACCAATTCTCCGGTTCTATCCCACCGGAACTTGGTAACTTGCCGGATTTAACATACCTTGATCTCGCCGTTAATTCGCTGACAGGGGAGATTCCGGTGGAGTTAACGAACCTAACGCTGAACCAGTTCAATGTCTCAGATAACAAGTTGTATGGAGAGCTTCCTTCGGGTTTCAACCACCAAGTTTACTTGTCGGGTCTAATGGGAAACCCGGATCTGTGTAGCCGGGTTATGAAAACCCTACCTTCTTGTTCCAAACGCAGACCCTTTTCTCTCGTTGCTATTGTCGTTTTAGTCGCTTGCGTTGTGCTCCTTGTGGGGTCCTTATTGTGGTTCCTGAAGAGCAAGTCGCTTGCTCTTGGTGGCAAATCCAAACGCTCCTTTATGACAACCGCGTTCCAAAGAGTGGGTTTCAATGAAGAAGACATGGTTGGAAACTTAACCAGCGAGAACGTTATTGGCATGGGAAGTTCGGGTCGGGTCTATAGGGTGGAGCTGAAGACAGGGCAAAGAGTGGCAGTGAAGAAACTGTGGGTTGGTACACAAAAGCCTGATATGGATTCTGTGTTCAGGTCCGAGATTGAAACGTTGGGTAGGATCCGGCATGCTAATATTGTGAAACTGTTGTTTAGTTGCAGTGCTGATGAGTTTAGAATATTGGTGTATGAATACATGGAGAATGGGAGCTTAGGGGATTTGTTGCATGTTGAGGACAAGTATGTGGAGTTGATGGATTGGTCTAGGCGATTCAGAATTGCTGTGGGTGTGGCTCAAGGGTTGGCTTATTTGCACCATGATTGTGTGCCCGCCATTGTTCACAGGGATGTGAAGAGTAACAACATATTGCTGGACCATGAGTTTTCGCCTCGTGTAGCAGACTTTGGGCTAGCTAAGACTTTGCAGCGTGAGGCCAGCCAGGGTTCCATGTCAAGGGTTGCTGGATCGTATGGTTATATTGCTCCAGAGTACGCTTATACAATGAAAGTGACTGAGAAGAGTGATGTCTATAGTTTTGGGGTGGTGTTGATGGAATTGATCACCGGCAAGAGGCCAAATGACTCTTCATTTGGTGAGAACAAGGATCTGGTGAAATGGGTCACTGAGAATGTTCTATCAACATCTCCTAAAGGAGGAAGTGGCAATATTGGAGAAAGTAATATTATGACCCAGGTGGTGGACCCAAGAATGAACCCAGAGACTTGTGATTATGAAGAGGTTGAGAAGGTTTTAAACGTGGCCCTACTTTGCACCTCAGCGTTTCCCATTAATAGACCCACAATGAGAAGGGTAGTTGAATTGCTCAAGGACCATAAACTGTCAGGTCCCAAGTCATGA	2937	0.4641	MLQLGLNFFPLLVLCLLSSTQGVSLESQSQILLEVKNTQLEDKNKSLKNWGYHNPCNWTGITCDTRNQSIVSIDLSEIGIYGEFPFGFCRIHTLQNLSLASNFLGNAISPNSLLLCSHLRLLNLSDNYFVGDLPEFPQEFTQLRELDLSRNNFTGDIPASFGQFPQLSVLLLFGNLLSGTIPSFLGNLSELTRLELAYNPFKPGPLPPQLGNLSNLETLFLANVNLVGDIPHSIGNLISLKNLDLSQNSLTGNIPSSISGLKNVQQIELFQNQLSGELPQELGNLSSLVRLDLSQNGFTGKLPDTIASLNLCSLNLNDNFLNGEIPLSLASNPNLQQLKLFNNSFTGKLPQDLGRNSAVEDLDVSTNDFIGELPKYLCQRNKLQRLVTFANRFSGTLPDQYAECDSLQYVRIQNNQLSGQVPPTFWTLRGLQFLEMANNRFQGSVSVSISNAKGLTKLLLSGNSFSGQFPTGICELDQLVEIDVSKNRFSGEVPTCITGLRKLQNLRMQENTFTGEIPSNVSSWTDMTELNLSHNQFSGSIPPELGNLPDLTYLDLAVNSLTGEIPVELTNLTLNQFNVSDNKLYGELPSGFNHQVYLSGLMGNPDLCSRVMKTLPSCSKRRPFSLVAIVVLVACVVLLVGSLLWFLKSKSLALGGKSKRSFMTTAFQRVGFNEEDMVGNLTSENVIGMGSSGRVYRVELKTGQRVAVKKLWVGTQKPDMDSVFRSEIETLGRIRHANIVKLLFSCSADEFRILVYEYMENGSLGDLLHVEDKYVELMDWSRRFRIAVGVAQGLAYLHHDCVPAIVHRDVKSNNILLDHEFSPRVADFGLAKTLQREASQGSMSRVAGSYGYIAPEYAYTMKVTEKSDVYSFGVVLMELITGKRPNDSSFGENKDLVKWVTENVLSTSPKGGSGNIGESNIMTQVVDPRMNPETCDYEEVEKVLNVALLCTSAFPINRPTMRRVVELLKDHKLSGPKS*	979

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g0796	978	Gene3D	Ribonuclease Inhibitor	204	309	IPR032675	-
	Apr7g0796	978	SMART	serkin_6	681	974	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g0796	978	SUPERFAMILY	RNI-like	277	611	-	-
	Apr7g0796	978	ProSitePatterns	Protein kinases ATP-binding region signature.	687	710	IPR017441	GO:0005524
	Apr7g0796	978	SUPERFAMILY	L domain-like	53	368	-	-
	Apr7g0796	978	Pfam	Leucine rich repeat N-terminal domain	26	64	IPR013210	-
	Apr7g0796	978	Pfam	Leucine rich repeat	214	274	IPR001611	GO:0005515
	Apr7g0796	978	Pfam	Leucine rich repeat	142	200	IPR001611	GO:0005515
	Apr7g0796	978	Pfam	Protein kinase domain	683	892	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g0796	978	Gene3D	Phosphorylase Kinase; domain 1	663	758	-	-
	Apr7g0796	978	Gene3D	Transferase(Phosphotransferase) domain 1	759	975	-	-
	Apr7g0796	978	Gene3D	Ribonuclease Inhibitor	23	203	IPR032675	-
	Apr7g0796	978	Gene3D	Ribonuclease Inhibitor	310	621	IPR032675	-
	Apr7g0796	978	ProSiteProfiles	Protein kinase domain profile.	681	974	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g0796	978	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	805	817	IPR008271	GO:0004672\|GO:0006468
	Apr7g0796	978	SUPERFAMILY	Protein kinase-like (PK-like)	674	968	IPR011009	-
	Apr7g0796	978	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2	17	973	-	-
	Apr7g0796	978	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	17	973	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr7g0796	Apr-Chr7	14947559	14951904	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr7g0796	23	972	Receptor kinase-like Gene Family	AT5G65710	57.348	0.0	1063

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Apr7g0796		Pkinase	6.9e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr7g0796	-		-	gmx:100813889	1543.87