Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0792 ATGACAACAACGGAGGAATCATGGACAAGTTGGTTGTGCGATTGGGAGGCAGAGGATTACAACAACTTTGTCAATGAATCCGATGGAAACGGGGTTGATGTAAGTTTCGCATTTGATGACGATATAGTCCCTGTAACACAGGAGGGGAACTTGCAACAATCTTTCTCTAATAATAGCAACGGCTTCAAAACAGAACACTCCAGCACCATGAGCATTTCCTCAGGGGATGACAACGGCTTTGACGAGAGACCTTCCAAGACACTCAAGACAGCCACTTCAAACTCTGCTAACACCACCAACACGGATTCTTCTCTCTCCTACATTCTTTCCTTTGAAAATGTGAATCCACCACCAATATTCAACATCGATTCCCCCTTGAAGCCAAAACGCAAGGCTGTGCATAGGAGATCTATTCCCTCAAAGGAAAAGGAAGCTATACCCAATATTCAAGAGAACAAGAACCCTGCGGTCAGATCTCCTCACCACGCTCAAGATCACATAATTGCTGAGAGAAAGAGGAGAGAAAGGATTAGCCAGCAGTTTATAGCGCTCTCGGCCCTTATTCCAGGCCTCAAAAAGGTGGACAAGGCGAGTGTGCTTGGGGATGCTATAAGGCACGTGAAACATCTCCAGGAGCAAGTGAAGTTACTGGAGGAGCAGAACAAATGGAAAAGTGTAGAATCGGTGGTATATGTTGAGAAATCTAAGTTATCTGCGGATGAAGATGTCTCGGATACGTCCTCAAATTCTGGTTCTGGTGCTGACGGCAACTCCTATGGCCCCTCAAAAACGAATGGATCACTGCCCGAAGTTGAGGCAAGGGTGTCAGGGAAGAACGTGCTGATTCGAATCCACTGCCACAAACAAAAGCAAGTGTTGACGAATATACTCCAAGAGATGGAGAATCTCCATCTTTCCGTCATCAATAGCAGTGTCTTGCTTTTCGGAACCTCCAAACTCGACATAACCATCGTAGCACAGATGGAGGATGAGTTGAGGCTGAACGTGAAGGAACTAGCTAGAACACTTAGGGTGGGACTCTTGCAAGATAGTAGTAGTATTATGTAG 1068 0.4579 MTTTEESWTSWLCDWEAEDYNNFVNESDGNGVDVSFAFDDDIVPVTQEGNLQQSFSNNSNGFKTEHSSTMSISSGDDNGFDERPSKTLKTATSNSANTTNTDSSLSYILSFENVNPPPIFNIDSPLKPKRKAVHRRSIPSKEKEAIPNIQENKNPAVRSPHHAQDHIIAERKRRERISQQFIALSALIPGLKKVDKASVLGDAIRHVKHLQEQVKLLEEQNKWKSVESVVYVEKSKLSADEDVSDTSSNSGSGADGNSYGPSKTNGSLPEVEARVSGKNVLIRIHCHKQKQVLTNILQEMENLHLSVINSSVLLFGTSKLDITIVAQMEDELRLNVKELARTLRVGLLQDSSSIM* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0792 355 MobiDBLite consensus disorder prediction 49 78 - -
Apr7g0792 355 Gene3D - 160 230 IPR036638 GO:0046983
Apr7g0792 355 MobiDBLite consensus disorder prediction 85 99 - -
Apr7g0792 355 MobiDBLite consensus disorder prediction 240 270 - -
Apr7g0792 355 CDD bHLH_AtNAI1_like 161 235 - -
Apr7g0792 355 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 2 348 - -
Apr7g0792 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 210 IPR011598 GO:0046983
Apr7g0792 355 PANTHER BHLH TRANSCRIPTION FACTOR 2 348 - -
Apr7g0792 355 Pfam Helix-loop-helix DNA-binding domain 165 211 IPR011598 GO:0046983
Apr7g0792 355 Coils Coil 200 220 - -
Apr7g0792 355 MobiDBLite consensus disorder prediction 242 265 - -
Apr7g0792 355 MobiDBLite consensus disorder prediction 49 99 - -
Apr7g0792 355 SMART finulus 167 216 IPR011598 GO:0046983
Apr7g0792 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0792 Apr-Chr7 14888864 14890706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0792 47 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.769 8.32e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g0792 HLH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0792 - - lang:109348843 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0792 7 14888864 14890706 Apr7g0792 7 14888864 14890706 ECH
Apr7g0792 7 14888864 14890706 Apr3g0023 3 402175 404000 PCT