Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0787 ATGGCTGGTTTGGATTTAGGCACAGCATCACGCTTTGTTCAAAATCTACACAGACCAGATTTCAACCTTCAGCAGCAGCAACAGCAACAACAACAAGCCGAATCCGAGGAAGACGCGAAGCAACCAGACCCGTTTTCCGGCGAAGATGGACCCCACCTAGCTAGCCCCGGTGACATCGTCGGTCGCCGGCCACGTGGACGCCCGCCGGGATCCAAGAACAAGCCGAAGCCGCCGGTGATCATAACGAGAGAGAGTGCCAACACGCTCCGCGCTCACATCCTCGAAGTCGGCAACGGCTGCGACGTGTTCGACAGTGTCGCCACCTACGCGCGGCGGCGCCAGCGCGGGATCTGTATTCTCAGCGGAAGCGGGACCGTCACCAATGTCACCTTGCGGCAGCCGGCGTCTGCGGGAGCCGTAGTCACACTTCACGGAAGGTTCGAGATACTATCTCTCACCGGATCTTTCCTTCCTCCGCCGGCACCGCCGGGCGCCACCAGTCTTACCATATATCTCGCCGGAGGACAGGGACAAGTGGTGGGTGGGAGTGTGGTGGGTGAGTTGACCGCTGCTGGACCCGTGATTGTGATCGCAGCTTCGTTCACGAACGTGGCTTATGAGCGGTTACCTTTGGAGGAGGAAGAACAAGTTCAGCTGCAGCCACAGGGGGTTGGTGGTGGTGGTGGAGCTGTAGGGAATAATAACCCTTTTCCTGACCCTTCTTCAGGATTACCTTTCTTCAATTTTCCACTCTCTATGCAGAATGTTCAGTTGCCTGTTGATGGTTGGGCGGGAAACTCGGCTACACGTTCACCATTTTGA 822 0.5706 MAGLDLGTASRFVQNLHRPDFNLQQQQQQQQQAESEEDAKQPDPFSGEDGPHLASPGDIVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSVATYARRRQRGICILSGSGTVTNVTLRQPASAGAVVTLHGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQVQLQPQGVGGGGGAVGNNNPFPDPSSGLPFFNFPLSMQNVQLPVDGWAGNSATRSPF* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0787 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 273 IPR014476 GO:0003680
Apr7g0787 273 MobiDBLite consensus disorder prediction 1 79 - -
Apr7g0787 273 MobiDBLite consensus disorder prediction 15 35 - -
Apr7g0787 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Apr7g0787 273 ProSiteProfiles PPC domain profile profile. 86 222 IPR005175 -
Apr7g0787 273 CDD DUF296 90 173 IPR005175 -
Apr7g0787 273 Gene3D - 89 222 - -
Apr7g0787 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 273 - -
Apr7g0787 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0787 Apr-Chr7 14804998 14805819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0787 1 273 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.590 6.35e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0787 - - jre:108994023 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0787 7 14804998 14805819 Apr3g0017 3 241677 242543 PCT