Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0785 ATGGATTCTCGGGAACCGCCTCAGCCACAACTGCCAAACATGTTGGTGGGACCCACTTCTTACCCTTCCATGATGGCCCCCGCCACCGCCCGATTCCCATTCAACAGCAACAACCCTTCCGAGCCTCTCAACATCAACAACAACATCAACAACACCAACGACGACGACAACAACAACAACATCATCAACAACAACAACAACAGTACCAGCGCCACGTGCGAGGCCCTCAAGCCGTGCGGGCTTTCCTCCGACTCGGCGAAGAAGAAGAGAGGGCGGCCCAGAAAATACTCGCCTGATGGCAACATCGCCTTGGGCCTGGCCCCAACTCCGGCCCACGCAGCCTCTTCTTCTTCCGCCCCCTCCACCGAACCACTCGCCAAGAAGAACCGGGGACGCCCTCCGGGCTCTGGGAAGAAGCAGATGGACGCCCTCGGAACCGGCGGAACTGGTTTCACTCCCCATGTCATCTTGGTTGATTCCGGCGAGGATATTGCTGCAAAAATTATGGCCTTTTGTCAACAAGGACCCAGGACAGTTTGCATTCTTTCTGCTAATGGTGCTATCCGTAATGTTACGCTTCGACAGCCAGCAATGTCTGCGGGTACTGTGACGTATGAGGGTCAATTTGAGATTATATCACTTTCAGGTTCTATAGTACTATCTGAAAATAATAGTGGTCGTAACAAACTGGATGGCCTGAGTGTGTCTCTAGCAGGGTCAGATGGACGAGTATTGGGTGGTGGAGTTGCTGGAACGCTTACTGCAGCATGCCCAGTGCAGGTGATTGTGGGTAGCTTTATTGCTGATGGCAAAAAGTCAAGCTCAAGTAACCTGAAATCTGGACCTTCTTCAACGCCATCGACCCAAATGTTAACGTTTGGTGCTCCTTTGACTCCAACCAGTCCTACTTCGCAAGGGCCTTCAACTGAGTCCTCTGAGGACAATGAGAATGGTCCTTTTAGTAAGGGTCCAGGACTCTACAATAATGCTAGCCAGCCCATTCATAATATGCCGATGTACCATCATCAATTATGGGCTGGCCAAACTCAGCAGTGA 1056 0.517 MDSREPPQPQLPNMLVGPTSYPSMMAPATARFPFNSNNPSEPLNINNNINNTNDDDNNNNIINNNNNSTSATCEALKPCGLSSDSAKKKRGRPRKYSPDGNIALGLAPTPAHAASSSSAPSTEPLAKKNRGRPPGSGKKQMDALGTGGTGFTPHVILVDSGEDIAAKIMAFCQQGPRTVCILSANGAIRNVTLRQPAMSAGTVTYEGQFEIISLSGSIVLSENNSGRNKLDGLSVSLAGSDGRVLGGGVAGTLTAACPVQVIVGSFIADGKKSSSSNLKSGPSSTPSTQMLTFGAPLTPTSPTSQGPSTESSEDNENGPFSKGPGLYNNASQPIHNMPMYHHQLWAGQTQQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0785 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 150 267 - -
Apr7g0785 351 MobiDBLite consensus disorder prediction 78 147 - -
Apr7g0785 351 MobiDBLite consensus disorder prediction 271 334 - -
Apr7g0785 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1 43 346 - -
Apr7g0785 351 MobiDBLite consensus disorder prediction 30 64 - -
Apr7g0785 351 MobiDBLite consensus disorder prediction 1 64 - -
Apr7g0785 351 CDD DUF296 152 266 IPR005175 -
Apr7g0785 351 Gene3D - 153 279 - -
Apr7g0785 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 266 IPR005175 -
Apr7g0785 351 ProSiteProfiles PPC domain profile profile. 148 288 IPR005175 -
Apr7g0785 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 43 346 IPR039605 GO:0003680
Apr7g0785 351 SMART AT_hook_2 127 139 IPR017956 GO:0003677
Apr7g0785 351 SMART AT_hook_2 87 99 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0785 Apr-Chr7 14776719 14781134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0785 68 351 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 49.544 4.15e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0785 - - gmx:100788026 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0785 7 14776719 14781134 Apr3g0015 3 217414 222103 PCT