Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0781 ATGGGTTGCTCTGCGAGGGAAAAACAAATTCGAGGGAATCGGAAACTTCATTCGGCAAAACCCGATTTCGATTCATCCTGTAATTTGAACAAAAAATGGATGGTACCCTTTAAAAACCATGTTGAGTTGGGTCTCAATCCCAATTCAAACCCTAACGTTGACTCATCGGGTTGGGTTTTGTGTATGGAGGGTCAATTGGAAGAGATTCTGTTGAAAAACATTGAAATTATATACAATAATACTGTGTCAAAGCTTGTTGCTTTGGGCTACAACGAGGATGTTGCCGTCAAAACGATTCTGCGAAATGGGCATTGTTATGGTGGCATGGATGTGTCCACAAACATACTACAGAACTCCTTGGCTTGTCTGAATAGTGGAAATTTTGATAATTGTGGATTCAACCCTGCGTTCTCTGACTTGAAGCAGCTCACAGAATACACTCTGGCGGGTATTGTGTCTCTGTTACAAGAAGTGAGGCCCAATTTGAATAGAGGTGATGCTATGTGGTGTCTCCTCATGAGTAATTTTCATGTGGGAAGGGCCAGCACCATCCAAATTCCGGTTGGCAACGAGTGTCCTTCTTATGCTGCAGTTGAGAATACAGGTATTGGTAACAATGCAGTTGGTGTTAATGCTCCACCTCTACAAAAGTTTCATGGGGAATCCATAGAATTTCCTGTGAATGGTTTCTTCTCTTATGGTCCGGGGATTAATTTTCAGTTACAGAGGGATATTGTATTCCCAAAAAGATTTAATCTTTCTCCTTCCATGAAGTCCTTATTGAAAAGAAATGTTGCAATGTTTGCTGCCAATTTTAGGGCTAACTCAAAACAGTTGCAGCCACAAGCCAAGGCCATTCCTAGCATTAGCACCATTTCGAAATTGGATTCTTCATCAGTTTCTGGGACTCCGGTCCTGGGCAAGCAGTCTGTTGAATTTCACCCTCTGAATAACCAAGAAGACTTGAATTCAGTGCTGAGTAAATTGCTTGATCTAAATATTGGTGAGAATTCAGAGTTTGTGGTAGAAGATCAGAAGGATGAGGTGATAGTCACTCTAGCTCATCAGATTAAGGATCTTGAGAAACAGGTTGAGGAGCAAAAAGATTGGGCTCATCAGAAGGCAATCCAAGCTGCAAGAAAGCTAAGCAGTGATCTGATTGAGGTGAGAAAATTAAAGATGGAAAGAGAGGCAAACCAACGACTGAAGAAAGGGAAAGAGGCACTTGATGACACAACCATGAAGAGACTCTCAGAAATGGAGAATGCCTTAAGGAGGGCTAGCGGTCAAATGGACCAAGCAAATGCAATTGTCAGAAAACTAGAGGCGGAGAATGCTGAAATCAGAGCAGAGTTGGAGGCTTCTAAATTAAGTGCATCAGAGTCAGTTTCAGCCTGCAAGCAGGTTATGCAAAGGGAGAAAAAGTGCTTAAAGAGGCTTCAAGCTTGGGAGAAACAGAAGGCCAAGATACAACAGAATATTTCAGATGAAAAACAGAAGATATTGGAGATAGAAGAAGAATTGGCTCAGATTAAACAGTGTGAAAAAGATGCTGAGGTCATGGGGAGGGAAGAATTGAAGGCTAAGGAGGAAGCCTTAGCACTAATTGAAGAGGAACGCCGTTCTAAGGAAGCAGCTGATACTAATAATAAAAGAAATCTTAAGGCTTTACGCCTGAAGATTGAGATAGATTTCCAGCGTCGTAAGGATGATCTTCTGAGGCTTGAGCAGGAGATTTCACGTCTTAAAGCATCTGCACATTCTGCTGATTTTCATCATCGAGCTAGGACTATGCCCCCAAATGAGTGTGAGGATGTAGAGCCCCAAAATGAGACAATTGATGAGCTTCTACAAGAATTAGACAATGCAAAGGATTCTTCAGAAAAAGAAGGCAACGGTAATAGAGAATGCATTATATGTGGAAAAGATGAACTTTCCATAATTTTCTTGCCATGTGCACACCAAATTATGTGTGCTAGCTGCAGTGAACAGTATGGGAGAAAGGCCAAAGCTGTCTGTCCATGCTGCCGAGTTCCAATCGAACAGAGAATCCGTGTATTTGGGGCAAGTTCGTAG 2076 0.4196 MGCSAREKQIRGNRKLHSAKPDFDSSCNLNKKWMVPFKNHVELGLNPNSNPNVDSSGWVLCMEGQLEEILLKNIEIIYNNTVSKLVALGYNEDVAVKTILRNGHCYGGMDVSTNILQNSLACLNSGNFDNCGFNPAFSDLKQLTEYTLAGIVSLLQEVRPNLNRGDAMWCLLMSNFHVGRASTIQIPVGNECPSYAAVENTGIGNNAVGVNAPPLQKFHGESIEFPVNGFFSYGPGINFQLQRDIVFPKRFNLSPSMKSLLKRNVAMFAANFRANSKQLQPQAKAIPSISTISKLDSSSVSGTPVLGKQSVEFHPLNNQEDLNSVLSKLLDLNIGENSEFVVEDQKDEVIVTLAHQIKDLEKQVEEQKDWAHQKAIQAARKLSSDLIEVRKLKMEREANQRLKKGKEALDDTTMKRLSEMENALRRASGQMDQANAIVRKLEAENAEIRAELEASKLSASESVSACKQVMQREKKCLKRLQAWEKQKAKIQQNISDEKQKILEIEEELAQIKQCEKDAEVMGREELKAKEEALALIEEERRSKEAADTNNKRNLKALRLKIEIDFQRRKDDLLRLEQEISRLKASAHSADFHHRARTMPPNECEDVEPQNETIDELLQELDNAKDSSEKEGNGNRECIICGKDELSIIFLPCAHQIMCASCSEQYGRKAKAVCPCCRVPIEQRIRVFGASS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0781 691 Coils Coil 417 458 - -
Apr7g0781 691 Pfam Zinc finger, C3HC4 type (RING finger) 634 682 - -
Apr7g0781 691 Coils Coil 606 630 - -
Apr7g0781 691 ProSiteProfiles Zinc finger RING-type profile. 637 677 IPR001841 -
Apr7g0781 691 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 612 688 IPR013083 -
Apr7g0781 691 SUPERFAMILY RING/U-box 636 683 - -
Apr7g0781 691 Coils Coil 565 585 - -
Apr7g0781 691 Coils Coil 473 524 - -
Apr7g0781 691 Pfam Family of unknown function (DUF6592) 73 181 IPR046527 -
Apr7g0781 691 Coils Coil 526 549 - -
Apr7g0781 691 PANTHER OS05G0141500 PROTEIN 1 690 IPR046934 -
Apr7g0781 691 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0781 Apr-Chr7 14741098 14744357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0781 595 687 C3H Transcription Factor Family AT1G73950 28.723 1.59e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0781 - - gmx:100777787 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0781 7 14741098 14744357 Apr3g0007 3 129790 137944 PCT