Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0779 ATGGGAGGGGCATCACTGCCTCCAGGTTTTCGTTTCCATCCAACTGATGAAGAACTATTAGGATATTACCTAAAAAGAAAAGTGGAGGGTCTTGAAATTGAGCTTGAAGTTATCCCCGTGATTGAATTGTACAAATTTGATCCCTGGGAGTTGCCGGAGAAATCTTTCCTACCAAAAAGAGATTTGGAATGGTTTTTCTTCTGTCCAAGGGATCGCAAGTACCCAAATGGATCACGGACTAATAGAGCTACCAAAGCTGGTTATTGGAAGGCCACCGGTAAAGACAGAAAGGTTGTATGCCAATCAAGTTCACCCACATCCACTGTGACTGGGTACCGTAAGACCCTTGTTTTCTATCGTGGAAGGGCCCCTTTAGGAGATCGAACGGATTGGGTTATGCATGAGTATCGCCTCTGTGATGATCTTGGACAAGGTTCCCAGGGTGCTTTTGCTTTGTGCCGAGTTATTAAAAAGAATGAGAAGGCCAACAATGATTCCTTGGGAGAACAGAAGGGTAAAAGCAAAGGTGGGAGCATTTCCATCAATGGGAATGACACCTCATTGAGAATCTCGAATGTCTCTGGTGACATTTCTTCTCAGGCAGGTCAACTTTGCTGTGAGAGTCGTTATTCTAGTCCTATTGATTCTCCATGCAATGTGGCTCCAGTGGCTGGATTTGAGCAAGCTTCAATGGACAATAATTCTTCAAGCATCTGGGTGTCCCCTGATATGATTCTTGATTCTTCAAAGGACTACTCTCAAATACAAGATGTGGTTGGATTCTTTCCACAGTATGAGTTACTGAGTTCAATGACTCCGTGGCAATCATTTGAACATACAGAAATTTCACCTAGTTCATCCTACTCAAATTTTAATGGGGAAATTGAATTTTCTGATGATCTCAGTCGAATTGGCTGCATGTCACCTTACTCAGGACAAGGAAATTTCATGGACTATTATGGGAATGAACATGTGTCTTACGAATGTTATGACCAAATTAATTCAATGAGTGACCCAAAACTATTCTGA 1029 0.4218 MGGASLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIELYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSSSPTSTVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQGSQGAFALCRVIKKNEKANNDSLGEQKGKSKGGSISINGNDTSLRISNVSGDISSQAGQLCCESRYSSPIDSPCNVAPVAGFEQASMDNNSSSIWVSPDMILDSSKDYSQIQDVVGFFPQYELLSSMTPWQSFEHTEISPSSSYSNFNGEIEFSDDLSRIGCMSPYSGQGNFMDYYGNEHVSYECYDQINSMSDPKLF* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0779 342 Gene3D NAC domain 15 163 IPR036093 GO:0003677|GO:0006355
Apr7g0779 342 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Apr7g0779 342 ProSiteProfiles NAC domain profile. 6 158 IPR003441 GO:0003677|GO:0006355
Apr7g0779 342 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 342 - -
Apr7g0779 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 342 - -
Apr7g0779 342 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0779 Apr-Chr7 14730492 14732827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0779 1 296 NAC Transcription Factor Family AT4G17980 56.908 4.96e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr7g0779 NAM 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0779 - - adu:107487585 509.605