Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0767 ATGGTTTGCACTGCTAATGATTTACAGGGATGGAAGGATTTCCCAAAGGGACTCCGGGTTCTTCTCCTTGAAGGAGATAGAAATTCTGCTGCCGAGATAAAAGCAAAGCTCGAGGCCATGGACTATAATGTTTCTACCTTCTATGATGAGAATGAAGCCTTGTCAGCATTCTCAAGTAGTCCTGAAGGTTTCCATGTTGCCATAGTGGAGGTGAGTACAAGCAGTAGCCATGGAGGTTTCAAATTTCTTGAAAATGTGAAGAACTTGCCTACCATTATGACTTCGAACAACCAGTGCCTGAACACCATGATGAAGTGCATTGCACTTGGTGCAGTCGAGTTCCTTAGTAAACCACTCTCTGAGGACAAGCTCAAAAATATTTGGCAGCATGTGGTTCACAAGGCATTTAATACTGGGGCAAGTTTCCAGTCTGAATCACTAAAACCTGTCAAAGAATCAGTAGAATCCATGCTGCAGCTCCAAACAGACAATGGACAAAATGAAAGTACGAATTCAATAGATTTAGAGAATGTTTCCAGGTGTAGTGACAATGACCAAGAGCATTCTGCTGGAAGTGATAAATATCCAGCTCCTTCAACCCCACAATTAGAACAGGGGACAAGGTTACTGGATGATGGAGATTGCCATGAGCAGACTAATTGCTCAACAGAGAAAGAAAGTGGGGAACATGATGGGGAATGCAAATCTGTCGAAACTTCATGTGAGAATTTGAATTCTGAAAGTTCTCAAGCAAGAGAACCTGAGAAGACTCTGATTAAGGAGGAAGAGGATTTTGCTAATGGTTCCAAGGTTAAGAGTGCTGTTTCACTGAATCCACATAATAGAAAGTTTCTCAGCAACAGCGATGGTAATAGATCTCCAAATAAAACGGGTGTACTTAATGATTCATGTGAGATTAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCATAAAAAATTTGTAAAGGCAGTTGAACAACTAGGTATTGATCAAGCTATTCCTTCTCGAATATTGGAGCTAATGAAAGTGGACGGTTTGACAAGGCACAATGTGGCAAGCCATCTTCAGAAATATAGAATACACAAGAGACAAAGTGCACCAGTGGAAGAAGATCCAAAATGGCATAATCAAAGAGATACAATGCAAAGAAACTATTATCTGCAAAGACCAATTATGGCCTACCCTCCATATCATTCTAATCACACCCTTCCTCCAGCTCCTGTATATCCTAGGTGGGGACAACCTGGCAGTCAAACCGCTGGTGTACAGATTTGGGGCCCTCCTGGTTATCCCTTGTGGCATCCTACAGAAAGTTGGCATTGGAATCCTTATCCTGGGGTGCATGTGGATGCATGGGGTTGTCCATTGTTGCCACCTGAACAATCGCCTTCTTTTTCCTACACTCAATCTATAACTGGTTTGCACAATGTTAAAGCAGTGAATTATAGATTTGGGATGCCACGAAGTTCCTTCGAGCATTATCCGGCAGAGGATGTGGTAGACAAGGTTGTGAAGGAAGCAATAAGCAAACCATGGCTACCCTTGCCCTTAGGTCTCAAACCTCCTTCTATGGACAGTGTTTTGGCTGAGCTATCCAAACAAGGCATATCCAACATCCCTTTTGGCAACAAGGGTTCTTCTACTTCTAGACCACGCTGA 1674 0.4277 MVCTANDLQGWKDFPKGLRVLLLEGDRNSAAEIKAKLEAMDYNVSTFYDENEALSAFSSSPEGFHVAIVEVSTSSSHGGFKFLENVKNLPTIMTSNNQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFNTGASFQSESLKPVKESVESMLQLQTDNGQNESTNSIDLENVSRCSDNDQEHSAGSDKYPAPSTPQLEQGTRLLDDGDCHEQTNCSTEKESGEHDGECKSVETSCENLNSESSQAREPEKTLIKEEEDFANGSKVKSAVSLNPHNRKFLSNSDGNRSPNKTGVLNDSCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKYRIHKRQSAPVEEDPKWHNQRDTMQRNYYLQRPIMAYPPYHSNHTLPPAPVYPRWGQPGSQTAGVQIWGPPGYPLWHPTESWHWNPYPGVHVDAWGCPLLPPEQSPSFSYTQSITGLHNVKAVNYRFGMPRSSFEHYPAEDVVDKVVKEAISKPWLPLPLGLKPPSMDSVLAELSKQGISNIPFGNKGSSTSRPR* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0767 557 SUPERFAMILY Homeodomain-like 311 368 IPR009057 -
Apr7g0767 557 Gene3D - 308 369 - -
Apr7g0767 557 MobiDBLite consensus disorder prediction 181 234 - -
Apr7g0767 557 MobiDBLite consensus disorder prediction 280 300 - -
Apr7g0767 557 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 312 367 IPR006447 GO:0003677
Apr7g0767 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 309 368 IPR017930 -
Apr7g0767 557 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 1 553 - -
Apr7g0767 557 MobiDBLite consensus disorder prediction 209 234 - -
Apr7g0767 557 Gene3D - 18 145 - -
Apr7g0767 557 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Apr7g0767 557 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Apr7g0767 557 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 553 IPR044825 GO:0003700|GO:0045893
Apr7g0767 557 SMART REC_2 18 128 IPR001789 GO:0000160
Apr7g0767 557 SUPERFAMILY CheY-like 16 134 IPR011006 -
Apr7g0767 557 Pfam Myb-like DNA-binding domain 315 364 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0767 Apr-Chr7 14619216 14625714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0767 1 545 Response Regulator Gene Family AT4G18020 48.258 9.92e-140 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr7g0767 Response_reg 4.2e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0767 - - gmx:100784905 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0767 7 14619216 14625714 Apr10g1697 10 29810818 29817966 PCT