Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0759 ATGGCGCTTTATCTTCTGTTTCGTCTTGTTGTTACTACCTTGATTTTCATGCAAACTCTGGCAGACACTTCATGCACCGATTGTTTCATTCATTCTCGGGCAGCATATTATCCAAATTCTGAAGAACACGGGACAGATGTTGGTGCGTGTGGGTTTGGTTCCTTTGGTGCTACGTTCAATGGCGGGGATGTATCAGCTGCATCTGATCTTTATCGAAACGGGGTTGGTTGTGGCGCCTGTTACCAGGTGAGGTGTAGCAACAGTGCGTATTGCTCAGACAAGGGTGTTAACGTAGTTATAACTGACCAAGGCTCAAGTGATCACACTGATTTTATTCTTAGCAAACATGCCTTTGGCCGGATGGCTCAAACCACTGATGCAGCTTCTTCTCTATTAGCACTTGGCGTAGTTGATATTGAATATAGACGTGTTGCATGCAGCTATCCGTATAAAAACATAACATTCAAGATAGATGACAGCAGCAACAACCCCCATTACTTGGCTTTTGTCATTTTGTATCAACAAGGAAGGAGAGACATAACTGCTGTGCAGCTCTGTGAGACTCAAAACTTTGTCTGCAAGTTACTGGATCGTAGCCATGGAGCAGTCTGGACTACTACCTCTCCACCAAGTGGACCTTTGTCTGTAAGGATGCTATTTAGTGATGAAGACGAGGGAGAAGAAACGTGGGTTGTTCCTGTCAATAACATACCTGAAGACTGGAAGGCTGGGGAAACATACGACTCAGGGGTACAAGTGAACCTATAG 768 0.4479 MALYLLFRLVVTTLIFMQTLADTSCTDCFIHSRAAYYPNSEEHGTDVGACGFGSFGATFNGGDVSAASDLYRNGVGCGACYQVRCSNSAYCSDKGVNVVITDQGSSDHTDFILSKHAFGRMAQTTDAASSLLALGVVDIEYRRVACSYPYKNITFKIDDSSNNPHYLAFVILYQQGRRDITAVQLCETQNFVCKLLDRSHGAVWTTTSPPSGPLSVRMLFSDEDEGEETWVVPVNNIPEDWKAGETYDSGVQVNL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0759 255 Pfam Lytic transglycolase 68 141 IPR009009 -
Apr7g0759 255 PANTHER POLLEN ALLERGEN ORY S 1, PUTATIVE-RELATED 8 254 - -
Apr7g0759 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 151 IPR007112 -
Apr7g0759 255 SUPERFAMILY PHL pollen allergen 151 249 IPR036749 -
Apr7g0759 255 PANTHER EXPANSIN-B3 8 254 - -
Apr7g0759 255 Gene3D - 150 253 IPR036749 -
Apr7g0759 255 SUPERFAMILY Barwin-like endoglucanases 18 149 IPR036908 -
Apr7g0759 255 Pfam Expansin C-terminal domain 153 231 IPR007117 -
Apr7g0759 255 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Apr7g0759 255 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Apr7g0759 255 PRINTS Expansin/Lol pI family signature 235 249 IPR007118 GO:0005576
Apr7g0759 255 Gene3D - 17 147 IPR036908 -
Apr7g0759 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 249 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0759 Apr-Chr7 14577981 14580149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0759 4 251 Expansin Gene Family AT4G17030 41.767 1.19e-61 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0759 - - gmx:100783848 473.396