Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0748 ATGGTGCTGAAAATGAAGTGTTTCTTCTTCAAACAAAGATCAAAATTGGACCCAGAATTACAAAAGCGTAGCAAGAAGAAAAATCAAGTTTTGAACCGAGCATCTAAGTCCATCAGCTCGCTACCATCGCCAAGGAGCATTAAGGAATTGTATAAAGAGAAAGAACATAATTTTAGAGTTTTTACCCTGCAAGAGCTCGTAGATGCAACAAATGGTTTCAATAGGATGCTAAAGATTGGAGAAGGTGGTTTTGGGAAAGTATACAGAGGAACAATTAATCCTTATCCTGAAGATGGACATGCTGATCCCATTGTGGTTGCAATTAAAAAACTTAACACGCGTGGCTTACAGGGGCATAAAGAATGGCTTGCTGAAGTTCAATTTCTTAGCGTTGTTAACCACCCGAATTTGGTTAAGCTTTTGGGATACTGCTCTGTGGATAGTGAAAGAGGAATCCAACGGCTGTTGGTGTACGAGTTCATGCCCAATAGGAGTCTGGAAGATCATCTTTTCAGTCATTCTTTGCCTCACTTGCCTTGGAAAACAAGGTTGCAGATAATGCTTGGTTCTGCTCAAGGATTACAGTATCTACATGAGGGATTGGAAGTTCAGGTGATCTACCGAGATTTCAAATCTTCAAACGTGCTATTGGACACGAAATTCCATCCCAAGCTTTCAGATTTTGGTCTTGCTAGGGAAGGTCCAACGGGTGATCAGACCCATGTATCTACTGCGGTAGTTGGGACACAAGGATATGCTGCTCCAGAGTATGTTGAAACGGGTCATCTCAAAATTCAGAGTGACATTTGGACTTTTGGTGTGGTACTTTACGAGATCCTCACAGGAAGGAGGGTATTGGATAAAAACCGTCCAACAGGGGAACAAAAGCTTATAGAATGGGTTAAAAAATACCCTGCTGAAAGTAGCAGATTCAGCATGATCATGGACCCACGGCTCAAGAACCAATATTCTCTTGGTGCAGCTCGAAGCATAGCCAAATTGGCAGATAGCTGCTTGAAGAAGAATCCTGATGAAAGGCCATCCATGAGTCAGATAGTTGAAAGCTTGAAACTAGCATTGCAGTTTTCAGAAACCTCAAACACTTGGCAGAATATGAATCCTAAATTGGTCCCAAAAGGTAAATAG 1146 0.4162 MVLKMKCFFFKQRSKLDPELQKRSKKKNQVLNRASKSISSLPSPRSIKELYKEKEHNFRVFTLQELVDATNGFNRMLKIGEGGFGKVYRGTINPYPEDGHADPIVVAIKKLNTRGLQGHKEWLAEVQFLSVVNHPNLVKLLGYCSVDSERGIQRLLVYEFMPNRSLEDHLFSHSLPHLPWKTRLQIMLGSAQGLQYLHEGLEVQVIYRDFKSSNVLLDTKFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVETGHLKIQSDIWTFGVVLYEILTGRRVLDKNRPTGEQKLIEWVKKYPAESSRFSMIMDPRLKNQYSLGAARSIAKLADSCLKKNPDERPSMSQIVESLKLALQFSETSNTWQNMNPKLVPKGK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0748 381 PANTHER RECEPTOR-LIKE KINASE PLANT 12 365 - -
Apr7g0748 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Apr7g0748 381 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Apr7g0748 381 PANTHER OS01G0588500 PROTEIN-RELATED 12 365 - -
Apr7g0748 381 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Apr7g0748 381 CDD STKc_IRAK 79 357 - -
Apr7g0748 381 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0748 381 Gene3D Transferase(Phosphotransferase) domain 1 161 376 - -
Apr7g0748 381 ProSitePatterns Protein kinases ATP-binding region signature. 79 110 IPR017441 GO:0005524
Apr7g0748 381 MobiDBLite consensus disorder prediction 21 41 - -
Apr7g0748 381 Gene3D Phosphorylase Kinase; domain 1 52 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0748 Apr-Chr7 14353683 14359561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0748 7 356 Glycoside Hydrolase AT3G07070 41.944 1.65e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr7g0748 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0748 - K00924 gmx:100305390 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0748 7 14353683 14359561 Apr7g0748 7 14353683 14359561 ECH
Apr7g0748 7 14353683 14359561 Apr10g1671 10 29418728 29421363 PCT