Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0739 ATGAATCCATGGAATCTCACAGCTTCTGAGTTACTCTCTCAACAATTTCCTTCTCCCCCTCATCATTTTGTAGAAGAGATTCCAAACTTGGGAAATTCCAGTGTTATGAAGCCATTGACCAAGGAGCCTAGAGGTGCCCAATTGACAATATTTTATGATGGGAAAGTTTTAGTCTTTGATGATTTTCCAGCCGAAAAAGCCAAGGACATCATGTCCTTAGCCAGTAGAAAAGGAATCTCTCAAAGCACGAACAACCGTGCTAATGCAATGAGAAACTCTGCAATTTCTAGTAGTCCATTTCCTTATCATAATAATATCTTCCCTAGCCCTGCCAACAATTCCATTCAGAAGCATCCTCAAGCACCATCCAAGTCTCTTGTTTGTGATCTACCAATGGCTAGGAAAGCCTCACTTCATCGGTTCTTGGAGAAAAGGAGGAATAGAATTGCTGCCAGAGCACCATATCAAACAAGCAATTCCATGGCAAATTTCAATAAGTCGGCTGAATCGATGTCGTGGCTCGGCTTAGCACCTAAATCGCCACAAGAGGAATCTGAGAGCAGCTCCAGCTTTGTGTTATTTTAA 585 0.4205 MNPWNLTASELLSQQFPSPPHHFVEEIPNLGNSSVMKPLTKEPRGAQLTIFYDGKVLVFDDFPAEKAKDIMSLASRKGISQSTNNRANAMRNSAISSSPFPYHNNIFPSPANNSIQKHPQAPSKSLVCDLPMARKASLHRFLEKRRNRIAARAPYQTSNSMANFNKSAESMSWLGLAPKSPQEESESSSSFVLF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0739 194 PANTHER PROTEIN TIFY 10A 5 177 - -
Apr7g0739 194 SMART tify_2 41 76 IPR010399 -
Apr7g0739 194 ProSiteProfiles Tify domain profile. 41 76 IPR010399 -
Apr7g0739 194 MobiDBLite consensus disorder prediction 175 194 - -
Apr7g0739 194 Pfam tify domain 43 75 IPR010399 -
Apr7g0739 194 Pfam Jas motif 131 156 IPR018467 -
Apr7g0739 194 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 5 177 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0739 Apr-Chr7 14296165 14297717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0739 42 177 Tify Gene Family AT1G19180 42.029 2.41e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr7g0739 tify 6.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0739 K13464 - gmx:100306332 238.81