Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0734 ATGGAACTTAGTTTAAAGTACCAACTTGGCCTCCTTTGTGCCACACTGCTTTTACCTGCCCTGTGTACCTCTCAGGACTTTTCTACTTGCTCCAGAGCAACCTATTACGGTAGCCCAGATTGTTATGGAAATCCAAGAGGAGCTTGTGGTTATGGCGATTATGGAAAGACGGTAAACGATGGCAATGTGGCAGGCGTGTCATGGCTATGGAGGAATGGATCTGGCTGTGGAGCATGTTATCAGGTTAGGTGTAAAATAGCACAATTCTGTGATGAGAATGGAGCATACGTGGTGGTGACAGATTATGGTGAGGGAGACAGAACAGACTTTATCATGAGTCCACGTGCCTATTCAAGATTGGGGAGAAACACAGATGCATCTGTAGAGCTTTTCAAATACGGTGTCGTGGATGTAGAATACAGAAGAGTCCCCTGTAGATACGGTAGCTATAACCTCTTGGTTAAGGTCCATGATCGTAGCAGAAACCCTCACTACTTAGCCATTGTAATTCTCTATGTTGGTGGCACTTACGACGTAACTGCTGTAGAGTTGTGGCAGGAAGATTGCCAAGAGTGGAGGCCAATGCGTAGGGCATTTGGGATAGTATTTGACGCAGAGAACCCCCCAAGGGGTGAGATCAAGTTGAGGTTCCAATTGAGGAGTAATGCAGAGCAATATTGGGCAGAGTCCAAGAATGTGATCTCTAGTAACTGGGAAGCGGGAGCTGTTTATGACTCGGAAATTCAACTTACTTAA 756 0.4577 MELSLKYQLGLLCATLLLPALCTSQDFSTCSRATYYGSPDCYGNPRGACGYGDYGKTVNDGNVAGVSWLWRNGSGCGACYQVRCKIAQFCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNTDASVELFKYGVVDVEYRRVPCRYGSYNLLVKVHDRSRNPHYLAIVILYVGGTYDVTAVELWQEDCQEWRPMRRAFGIVFDAENPPRGEIKLRFQLRSNAEQYWAESKNVISSNWEAGAVYDSEIQLT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0734 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
Apr7g0734 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Apr7g0734 251 Gene3D - 146 247 IPR036749 -
Apr7g0734 251 SUPERFAMILY Barwin-like endoglucanases 16 147 IPR036908 -
Apr7g0734 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Apr7g0734 251 Pfam Expansin C-terminal domain 154 234 IPR007117 -
Apr7g0734 251 SUPERFAMILY PHL pollen allergen 152 246 IPR036749 -
Apr7g0734 251 Gene3D - 20 145 IPR036908 -
Apr7g0734 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Apr7g0734 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Apr7g0734 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Apr7g0734 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Apr7g0734 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Apr7g0734 251 Pfam Lytic transglycolase 63 140 IPR009009 -
Apr7g0734 251 PANTHER EXPANSIN-B3 4 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0734 Apr-Chr7 14267165 14269187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0734 1 251 Expansin Gene Family AT4G17030 58.730 1.60e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0734 - - gmx:100802855 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0734 7 14267165 14269187 Apr10g1652 10 29151368 29152965 PCT