Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0733 ATGCTGAATTCAGAGGCGTCAGGAGGAATGGCAATGCCAGTCAATGATGGTCATTCTGAAAAAAGACGTAGGATGCCGATGATGGAAAATGGAGACTTCACTTTCCTTGCTCGGCCCATGTATAAGAGGCGTAAAATTTCTGCAGTTCGTGATTTCCCAGAAGAATGTGGATCGTCCGCTTCAGTGATTGATCCGGTGTTAAAGATAAATATTGCAGGTTGTCATTCTGCTGATGGTACAATTGTTGAGGATAAGAATGGGGAACAATTTGGGGGTAATACTGTTGTAATTTCCAAATGTGAAAATGGTCCTCAGCATTCTGAGTTTCAAAATGGTTCATTTATTACTGAGAATCTTGGCCAAACAACCGACTGTTATTTGAACAAGGAAAATTCTGTGGTCCCATCTCATCAGGTGGATGGGCTTACTGCCAATGCTGAACATGCAGAAGTTCCATTAATGAACATGGTAACTTTGGATACAGAGCCTGCAAGACTTGCAGACTCTGTAAAATGTGATTCCTCTGATTTGTTAAAGTCATCTTCTCCAGTGGATGAGGTGGCTGTATTAGATGGTTCAAAGTCTTTATCTTTCAATGTCTATTTACCTGGTTCCAGTACTTGTAGTGAGGAGGTTGTATGTCCAAGGGATTTTCCTCAAAGAACAGTTTCTGCTGTTAGAGACTTTCCCCCTTTCTGTGGACGTAATGCTCCACGTCTCAGTAAGGATGTGTGTCTAGAGCAGATCTCTTCATTGAATAATGAGAAAGTAGACTTGGCTGTAGGTGACAATCCATTGAAAGGCGTAGCAGTAACCGATGTAAAAGAAGTGAAAAATAATGTTCAAGATGAACACCGATGCAAGGGGAAGCTTGTGGACATCATTCAAACTGATTCTGAAAGGAATGCTACAGAGAGAGTGAAGAAGCTAAATGTATTTGAACCAACTTCTGAGGTGAAATTGCGCATGGAAAACACAAGTAAAAAGTACGTTACACTTCCTGAAAAAGGTAATAATCATCATCAGGTTAAAATAAATTCCAAGTCGGAGGTAAAAGAGCAAAACAGGGATGGTGTACTGGCTGATGCAACATCAGGGCTAGAGATTATAGTTCATCCAGATGTCCAAAGTCCCATGACAAAGCCTTTAAACATGTCTAGTTCTCAGCATAAGTTGAAAGGAGATTTTAATCGATTGCAGGTCTCATTGGACAGGAAAGTAGTGCTAGGTTTGATGGCTACATCAGAATGTCCTTGGAGGTCTGATAAAGTTTTTCGCAAATATAAGTCAGTTGATAGTACAAAGAAAAAAAAGGGAAAGAATTTGGATTCTCTTGCACCTCTTGGAAGGTCTAAATCTGCTATCAAGACAAAAAAAGGTGCATTGAATCTTTCTGGGAAGAAGTCTTTGAAAAGTATAAAAGGAAGTGCTGCTTCTGAAGGTATGAATCAATTAGTAATTTGGGAAAAGACGGATTTTCTTGATGCTATTGAAAATATTGAAGACCTTCAAGTTGTTTCAAAATCACAGAGTTTCAATGTAATTGTGCCTCCCCCTGGTCATTCTAGTGGTCATGTGAATGACTCGAATGTGACCCGAAATAAAGTGAGGGAAACATTACGTCTGTTTCAAGCTGTTTCTAGAAAGCTTTTACAGGAAGTAGAATCAAAATTAAAAGAGCGAGCAAATAATAAGAGGGTTGATTTGCAAGCTGCAAAGATCCTTAAGGAGAAAGGGAAATATGTTAACTCAGGCAAGCAGATCCTGGGATCTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTATAGGGTGGAGCTTAATATAATTGGGCTTCATCGTCAGATTCAGGGTGGCATAGATTATGTGAAGCACAATGATAAAATCCTTGCAACTAGTATTGTTGCATCTGGGGGCTATGCTGATGATTTGGATAATTCAGATGTCTTGACATATACAGGGCAGGGTGGAAATGTGATGAACAGTGATAGAGAACCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGAAGAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATCCGTGGCTATGAATCAACGGATGGAAAGTGTAGGACATATGTTTATGATGGACTCTATGAAGTTGAGTCATTTTGGCAGGGTAGGGGACCGCATGGGAAACTGGTTTTTAGGTTTCGCCTGCAGAGAATCCCCGGCCAACCAGAGCTTGCTTTGAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGAGACGGTCTATGTGTTGATGATATTTCTTATGGAAAAGAGAGAATTCCCATATGTGCTGTGAACTCCATAGATGACGAAAAACCCCCTCCATTTAATTACATAACTAGCATTATATACCCTGGGTGCCATCTTGTTCCTGCAGAAGGATGTGATTGTACTAATGGATGCTCTGACTTGGAGAAATGTTCTTGTGTGGTGAAAAATGGGGGAGAGATCCCATTCAATCACAATGAGGCTATTGTAGAAGCGAAGCCTCTGGTGTTTGAGTGTGGACCTTCTTGCAAGTGTCCTCCAACATGCCATAATAGAGTCAGCCAACGGGGTGTAAAGTTTCAACTTGAAATTTTTAAAACCCAAGAAAGGGGATGGGGTGTGAGATCCCTGAATTCAATCCCTTCGGGTAGTTTTATCTGCGAATATATAGGTGAGCTTCTTGAAGAAAAGGAAGCTGAACAAAGGACTGGAAATGATGAGTATCTTTTTGATATTGGAAATAACTACAGTAACAGTACACTTTGGGATGGACTTTCAACACTCATGCCCGATGCACAGGCAAGTTCTTGTGAAGTTGTGAAGGATGGTGGCTTTACCATTGATGCTGCTCAGTTTGGTAACGTGGGGAGATTCATCAACCATAGTTGCTCCCCTAATCTTTATGCTCAAAATGTCCTTTATGATCATCATGACACCAGGATGCCTCACATAATGTTCTTTGCTGTTGAGAACATTCCTCCCTTGCAAGAGCTTACTTACGATTACAATTATGCAATAGATCAAGTACGTGATTCTGAGGGCAATGTTAAAAAGAAGTATTGCTATTGTGGTTCTGTGGAATGTTCTGGTAGGATGTATTGA 3117 0.4055 MLNSEASGGMAMPVNDGHSEKRRRMPMMENGDFTFLARPMYKRRKISAVRDFPEECGSSASVIDPVLKINIAGCHSADGTIVEDKNGEQFGGNTVVISKCENGPQHSEFQNGSFITENLGQTTDCYLNKENSVVPSHQVDGLTANAEHAEVPLMNMVTLDTEPARLADSVKCDSSDLLKSSSPVDEVAVLDGSKSLSFNVYLPGSSTCSEEVVCPRDFPQRTVSAVRDFPPFCGRNAPRLSKDVCLEQISSLNNEKVDLAVGDNPLKGVAVTDVKEVKNNVQDEHRCKGKLVDIIQTDSERNATERVKKLNVFEPTSEVKLRMENTSKKYVTLPEKGNNHHQVKINSKSEVKEQNRDGVLADATSGLEIIVHPDVQSPMTKPLNMSSSQHKLKGDFNRLQVSLDRKVVLGLMATSECPWRSDKVFRKYKSVDSTKKKKGKNLDSLAPLGRSKSAIKTKKGALNLSGKKSLKSIKGSAASEGMNQLVIWEKTDFLDAIENIEDLQVVSKSQSFNVIVPPPGHSSGHVNDSNVTRNKVRETLRLFQAVSRKLLQEVESKLKERANNKRVDLQAAKILKEKGKYVNSGKQILGSVPGVEVGDEFQYRVELNIIGLHRQIQGGIDYVKHNDKILATSIVASGGYADDLDNSDVLTYTGQGGNVMNSDREPEDQKLERGNLALKNSSEEKNPVRVIRGYESTDGKCRTYVYDGLYEVESFWQGRGPHGKLVFRFRLQRIPGQPELALKEVKKSKKFKTRDGLCVDDISYGKERIPICAVNSIDDEKPPPFNYITSIIYPGCHLVPAEGCDCTNGCSDLEKCSCVVKNGGEIPFNHNEAIVEAKPLVFECGPSCKCPPTCHNRVSQRGVKFQLEIFKTQERGWGVRSLNSIPSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNNYSNSTLWDGLSTLMPDAQASSCEVVKDGGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDTRMPHIMFFAVENIPPLQELTYDYNYAIDQVRDSEGNVKKKYCYCGSVECSGRMY* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0733 1038 ProSiteProfiles SET domain profile. 865 1008 IPR001214 GO:0005515
Apr7g0733 1038 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 469 1037 - -
Apr7g0733 1038 ProSiteProfiles YDG domain profile. 590 733 IPR003105 -
Apr7g0733 1038 SUPERFAMILY PUA domain-like 571 746 IPR015947 -
Apr7g0733 1038 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 403 1038 IPR025794 GO:0016571
Apr7g0733 1038 CDD SET_AtSUVH-like 783 1009 - -
Apr7g0733 1038 Gene3D - 571 753 IPR036987 -
Apr7g0733 1038 SMART preset_2 759 849 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0733 1038 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 469 1037 - -
Apr7g0733 1038 Gene3D SET domain 754 1038 IPR046341 -
Apr7g0733 1038 SMART G9a_1 585 737 IPR003105 -
Apr7g0733 1038 Pfam SET domain 876 1008 IPR001214 GO:0005515
Apr7g0733 1038 ProSiteProfiles Pre-SET domain profile. 802 862 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0733 1038 MobiDBLite consensus disorder prediction 1 22 - -
Apr7g0733 1038 Pfam SAD/SRA domain 589 737 IPR003105 -
Apr7g0733 1038 SMART set_7 865 1014 IPR001214 GO:0005515
Apr7g0733 1038 ProSiteProfiles Post-SET domain profile. 1022 1038 IPR003616 -
Apr7g0733 1038 SUPERFAMILY SET domain 750 1009 IPR046341 -
Apr7g0733 1038 Pfam Pre-SET motif 762 857 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0733 Apr-Chr7 14260429 14264699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0733 530 1035 Su(var)3-9 homologs AT5G04940 40.952 6.07e-120 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr7g0733 SAD_SRA 1.5e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0733 K11420 - gmx:100803378 1302.73