Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0732 ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGTAATGGACCACCAGAGAAGCCGGTACTATGCAATGCATGTGGGTCTCGATGGAGGACAAAGGGAACACTTGCAAACTATACCCCTTTACACGCTCGGGCAGAAACAGATGATTATGTGGATCAAAGGGTTTCCAGGGTGAAGAGCATATCGTTAAATAAGAACAAAGAGGTGACATTGCTCAAACGAAAGCATAACTATGATAATGTAGTATCTGGAGGGTTTGCACCTGATTACAACCAGGGATTCCAAAAGGCTGTAATAGAAGAAGATACTAGCAATCGATCGAGTTCAGGATCAGCTATCTCTAACTCGGAGAGCTGCGCACAATTTGGTGGCATGGATGCTAGTGATCTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGTGTGGGTCGTCCAAAGCCTTCTTCTGTTGAGAAGCTCACAAAAGATTTATGCACTATTCTTCATGAACAACAGTCTTATTTTTCTGCATCTTCTGAAGAAGATCTTCTTTTTGAAAGTGATACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCGTTCTCATTAGGCATCCTAGCTATATAGCTCGTGAAGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAGACAATGCCCAATGAGTGAGGCATATTCAGGTGCCATTCTTATGCGTAATGATTCTAGTCACACATCTCAGGTTATTGAAAAGATCAGGAACTTTGTTGGCCAAGGAATGCAGCAGGAGCAACTTAAAAGTGACAAGTCTCATCTTGAAAGAATCCTTGGAAATCATGAATCACCACTTTGCTTAATAGATTTACAGGATGTTGTAAATTATGAAGAGTTTTTAAGAATCTTGACAAATGAAGAGCAGCAGCGATTACTGAAGTTACTTCCTATGGTTGATACTGCTAAACTTCCTGACAGCCTTAAAGTGATGTTCAACAGTTCTCAATTCAAAGAGAACTTGACTTATTTTCAGCAGCTTCTTGCTGAAGGAGTTTTTGATATCTCGTTGTTGGGGGCAAAACCTGAAGACTGCAAGACTTTGAAAAGACTTGCATTATCCAATCTGTCAAAGTCAAAATGGGTAGAACACTATAATTTTCTTAAGTTGCAGAGACGCAAAAACAGAGTTGGAAAATCTAGTACTATGGGATCTACTGGTACAGCATCAACTAGTGTTGCAAATGGCAAGGCATCAACTAATGTTGCAAACATCAAGAGAATGCGTGACAGCAGAAATCAGAACTTTCCAGAATTGAAGACAATAATGAGGAGCCCAAAAAGAGTGATCTCAAAGGGTGGCTGTGAGGGCAAACAAGCTGTAGAAGATGGTGCTTGCTATAGTCCAAAAAGCCTATTTGCTTTGCCTCCTGATGCAAGTTCACTCTTGCTGGATTCTTTAAACTTTGATGAGGAGAGTGGTGATCAAGATCTTCTGCTAGAGGTGCCATCTAACACTTCTTTTCCACAAGCAGAGCTTCTTCACCCAACTTTAAGCCTTGCAGCTCAAACCAGCACTAGTAGTAACTCAGTATACTCACATCTTCAGCATTAG 1635 0.4177 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETDDYVDQRVSRVKSISLNKNKEVTLLKRKHNYDNVVSGGFAPDYNQGFQKAVIEEDTSNRSSSGSAISNSESCAQFGGMDASDLTGPAQSVVWDAMVPSKKRTCVGRPKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSVLIRHPSYIAREEESEASSLSVDNRQCPMSEAYSGAILMRNDSSHTSQVIEKIRNFVGQGMQQEQLKSDKSHLERILGNHESPLCLIDLQDVVNYEEFLRILTNEEQQRLLKLLPMVDTAKLPDSLKVMFNSSQFKENLTYFQQLLAEGVFDISLLGAKPEDCKTLKRLALSNLSKSKWVEHYNFLKLQRRKNRVGKSSTMGSTGTASTSVANGKASTNVANIKRMRDSRNQNFPELKTIMRSPKRVISKGGCEGKQAVEDGACYSPKSLFALPPDASSLLLDSLNFDEESGDQDLLLEVPSNTSFPQAELLHPTLSLAAQTSTSSNSVYSHLQH* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0732 544 Pfam Asx homology domain 272 361 IPR028020 -
Apr7g0732 544 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Apr7g0732 544 Gene3D - 3 83 IPR013088 GO:0006355|GO:0008270
Apr7g0732 544 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Apr7g0732 544 Gene3D - 287 386 IPR038108 -
Apr7g0732 544 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Apr7g0732 544 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Apr7g0732 544 PANTHER OSJNBB0038F03.10 PROTEIN 1 544 IPR044589 -
Apr7g0732 544 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 289 401 IPR044867 -
Apr7g0732 544 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 544 - -
Apr7g0732 544 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Apr7g0732 544 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0732 Apr-Chr7 14251725 14257967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0732 1 522 C2C2-Gata Transcription Factor Family AT4G17570 54.221 5.08e-166 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Apr7g0732 ASXH 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0732 - - gmx:100803914 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0732 7 14251725 14257967 Apr10g1649 10 29118494 29124766 PCT