Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0717 ATGAACACAAACGAACCCCAATTACATAAGACGGAAACATATTACGGTTACGAAATGTATCAACAGAGTACCTATGAGTCCGATTTGGCCCTGTTGGACTCCATTCGCCGCCACTTACTCGGCGATTCCGACGTATGCAGATTCGGAGCGCCGTCTGTTAATTCGGGTAACACTCCAATTTACTGTCGGAGCTCCAGCTTCAGCAACTTGTACCCATGCTTGAGTGAAAATTGGGGTGAACTTCCACTTAAGGAAGACGATTCAGAGGACATGTTACTTTACGGTGTGCTTCGCGACGCCGTCAACGTTGGCTGGGTCCCATCTCTCGACGCTGGGTCGCCGGAGAGTTTCTCGTCGGGTTTTTTGCCGGTGGAGACAGTTAAATCAGAACCGGACCTTTCTCCGGCGCCGGAACCCGTCTTTGTCTCCCCGGTGATTCCTCAAGAGAAGGCTGCGCCGGCGGCGGTTCCGGCTAAAGGGAAACATTACCGCGGCGTACGGCAACGGCCGTGGGGCAAATTCGCGGCTGAGATCCGTGACCCGGCTAAGAATGGCGCTCGGGTTTGGCTCGGAACATTCGAAACGGCCGAGGACGCCGCGCTGGCTTATGACCGAGCCGCGTACCGAATGCGCGGCTCGCGGGCTCTATTGAACTTTCCGCTTCGGGTCAATTCGGGCGAACCTGACCCGGTTCGTGTGACGTCGAAGCGGTCATCGCCGGAGCCTTCGTCGTCGTCGGAGAGTGTGTCGTCGGTGAAGCGTAGAAAGAAAATGGTGGGGGCAACGGTGATGGGTCAAGTTGGATTGAAAACGGGGCAAGTGGGAAGTCAAGTGGCACAGTGTACACGTGGAGAACAGTTATTGGTCAGCTAA 873 0.5544 MNTNEPQLHKTETYYGYEMYQQSTYESDLALLDSIRRHLLGDSDVCRFGAPSVNSGNTPIYCRSSSFSNLYPCLSENWGELPLKEDDSEDMLLYGVLRDAVNVGWVPSLDAGSPESFSSGFLPVETVKSEPDLSPAPEPVFVSPVIPQEKAAPAAVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPEPSSSSESVSSVKRRKKMVGATVMGQVGLKTGQVGSQVAQCTRGEQLLVS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0717 290 Pfam AP2 domain 162 212 IPR001471 GO:0003700|GO:0006355
Apr7g0717 290 SMART rav1_2 162 226 IPR001471 GO:0003700|GO:0006355
Apr7g0717 290 Gene3D AP2/ERF domain 161 223 IPR036955 GO:0003700|GO:0006355
Apr7g0717 290 ProSiteProfiles AP2/ERF domain profile. 162 220 IPR001471 GO:0003700|GO:0006355
Apr7g0717 290 PANTHER DNA-BINDING DOMAIN 43 271 IPR044808 GO:0003700|GO:0009873
Apr7g0717 290 PRINTS Ethylene responsive element binding protein signature 163 174 IPR001471 GO:0003700|GO:0006355
Apr7g0717 290 PRINTS Ethylene responsive element binding protein signature 186 202 IPR001471 GO:0003700|GO:0006355
Apr7g0717 290 MobiDBLite consensus disorder prediction 226 257 - -
Apr7g0717 290 CDD AP2 161 220 IPR001471 GO:0003700|GO:0006355
Apr7g0717 290 PANTHER BNAANNG21280D PROTEIN 43 271 - -
Apr7g0717 290 SUPERFAMILY DNA-binding domain 162 222 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0717 Apr-Chr7 14086465 14088789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0717 19 289 AP2-EREBP Transcription Factor Family AT4G17500 55.477 4.78e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr7g0717 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0717 K09286 - gmx:100819649 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0717 7 14086465 14088789 Apr7g0717 7 14086465 14088789 ECH