Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0716 ATGGCCAACCCAGTCGACGTTTCTGCCATCAATCGCATCAAATTGCATCTTTTCGGCGAACTCTCTCCCCTCCCACCCTCTAACCTCTGCTTTCAATTTAACGGACCAAACCCAACTTCTTCTCCATCAAACTCTCTCTCTTCTCAATCTTCCAGTTCCGATTCTTCATCCACAGAGGAACGAGCATTCACTGAACTCTTCGAGTTCGCAACCGCTTCCGCGGAAAATCAATTTCCCCTCTTCGAACAGCAAACATCGGTGTTAGACATCAGTTTTTCAAACACAGAGACAACATCGGACCCTGCACCTCAAACCGTGGAGAAGAAACCTCAATCGAATCGAAAACCATCGTTGCAAATCTCCCTCCCGAAGAAGACCGAGTGGATCCAATTCGGAGACCCAGAGGTAACCGAAACGGTGTCGCATAATGATTCAAACGCAGAAGAGAAGAAGCACTACAGAGGAGTCCGACAGAGACCGTGGGGGAAGTACGCTGCGGAGATCCGAGACCCGAACAAGCGAGGATCCAGGGTGTGGCTCGGGACATTCGACACGGCTATCGAAGCCGCCAAAGCCTACGACCGAGCCGCGTTTAGGCTTCGCGGCTCCAAAGCCATCCTCAACTTCCCGCTGGAAGCCGGCGCCGAAGAACGAAAGCGCCACAGGGAAGAGGCTGAGGAGGAAGTCGTGAAGAGGAACAAAACGGCGGAATACGACGTTAGCGGCATTAATGATACTCCGTTAACGCCGTCTAGCTGGTTAGGGTTTTGGGACAGTGATTTAAAGGGAATTTTCACCGTGCCGCCGTTGTCGCCGTTATCTCCACACCCGCCGTTGGGTTATCCACAACTAATGGTTGTGTGA 864 0.5197 MANPVDVSAINRIKLHLFGELSPLPPSNLCFQFNGPNPTSSPSNSLSSQSSSSDSSSTEERAFTELFEFATASAENQFPLFEQQTSVLDISFSNTETTSDPAPQTVEKKPQSNRKPSLQISLPKKTEWIQFGDPEVTETVSHNDSNAEEKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGAEERKRHREEAEEEVVKRNKTAEYDVSGINDTPLTPSSWLGFWDSDLKGIFTVPPLSPLSPHPPLGYPQLMVV* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0716 287 SUPERFAMILY DNA-binding domain 152 211 IPR016177 GO:0003677
Apr7g0716 287 MobiDBLite consensus disorder prediction 32 59 - -
Apr7g0716 287 MobiDBLite consensus disorder prediction 93 154 - -
Apr7g0716 287 ProSiteProfiles AP2/ERF domain profile. 152 210 IPR001471 GO:0003700|GO:0006355
Apr7g0716 287 SMART rav1_2 152 216 IPR001471 GO:0003700|GO:0006355
Apr7g0716 287 Gene3D AP2/ERF domain 151 212 IPR036955 GO:0003700|GO:0006355
Apr7g0716 287 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 272 - -
Apr7g0716 287 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 4 272 - -
Apr7g0716 287 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Apr7g0716 287 PRINTS Ethylene responsive element binding protein signature 192 212 IPR001471 GO:0003700|GO:0006355
Apr7g0716 287 CDD AP2 151 210 IPR001471 GO:0003700|GO:0006355
Apr7g0716 287 Pfam AP2 domain 152 202 IPR001471 GO:0003700|GO:0006355
Apr7g0716 287 MobiDBLite consensus disorder prediction 93 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0716 Apr-Chr7 14060216 14061376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0716 114 287 AP2-EREBP Transcription Factor Family AT5G47230 61.579 1.95e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr7g0716 AP2 7.2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0716 K09286 - gmx:100808173 340.502