Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0706 ATGAAAAAGAGAGGCAGTGATGGGAAGCACCCAACGTATCGAGGGGTACGCATGAGACACTGGGGAAAATGGGTATCAGAAATAAGAGAGCCAAGAAAAAAGTCCAGAATTTGGCTTGGCACTTTTTCCACGCCAGAGATGGCGGCTCGAGCCCATGATGTTGCGGCTCTCACCATCAAAGGCTCCAGCGCTTTCCTCAATTTCCCCGAACTAGCCTCACACCTTCCACGCCCACTCACCACTTCCCCTAAAGACATCCAAGCCGCCGCCGCCCAAGCAGCTCAATTCAATTACCACCACCAAACCAAAACCTGTTATCAAGCCCAAGCCCAAGCCCAGGCCCAAGAATCCTCGACCGACGATGATGACACGTTCTTCGACCTCCCTGATCTTTTGCTCGACTCAAGTAATTGTGCAGGTGAGTTTCATTACTCCGCGCCGTGGCTCGTGGCCGGAGCTGAACTTCTAGACACGTGTCTCCGGCTGGAAGAGCCTCCTTTCCCTTGGGAGTCTTACTAA 519 0.5299 MKKRGSDGKHPTYRGVRMRHWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGSSAFLNFPELASHLPRPLTTSPKDIQAAAAQAAQFNYHHQTKTCYQAQAQAQAQESSTDDDDTFFDLPDLLLDSSNCAGEFHYSAPWLVAGAELLDTCLRLEEPPFPWESY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0706 172 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 143 - -
Apr7g0706 172 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Apr7g0706 172 SUPERFAMILY DNA-binding domain 12 70 IPR016177 GO:0003677
Apr7g0706 172 SMART rav1_2 12 75 IPR001471 GO:0003700|GO:0006355
Apr7g0706 172 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 4 143 - -
Apr7g0706 172 ProSiteProfiles AP2/ERF domain profile. 12 69 IPR001471 GO:0003700|GO:0006355
Apr7g0706 172 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Apr7g0706 172 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Apr7g0706 172 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Apr7g0706 172 Gene3D AP2/ERF domain 12 70 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0706 Apr-Chr7 13905374 13905905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0706 2 167 AP2-EREBP Transcription Factor Family AT2G44940 46.667 2.79e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr7g0706 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0706 - - gmx:100817503 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0706 7 13905374 13905905 Apr10g1625 10 28830712 28832051 PCT