Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0691 ATGGAGAGGCACAAATGCAAGCTTTGCTCAAGAACATTCCCCAATGGAAGAGCACTCGGTGGCCACATGAAGGCTCACTTAGCCACCCTTCCCCTCCCTCCCAAACCTCAACCTCTCTCTTTCTCTTCTTCAGAAGACGAACACCATGCACCCGCACACAGAGAATCCGACGATAAGGCTCTCATTTATGGCCTGCGAGAGAACCCCAAGAAAAGTCTCAGACTCGCAGATCCCGGGTTCTCTTTCCCCGTCGACACTGGCTCCGTCGTTCAAGACAGAGAGAGCGAGACCGAGTCAAAGAACCCAACTCGCCGACGATCCAAGCGAACTCGGAAACCCGTTCAAGCCCAGAATTTGGAGGAGCCCAAAAGGCCCAAACTGAGTTTCATGGAGTCACCGACCGAGCCAGAACCGCTGAGCTCTGTTTCCGACACTTCCCCTGAAGAAGACGTTGCCATGTGTCTCATGATGCTGTCCAGGGACAGGTGGAGGAGGAACAAAGTTGTTGCTGTCAAGGAAGAAGAAAAATCTGTTGAAAACTCAAAGGGGTTGTTAGAAGAAGAGATCAAGTTCAGGAGAGTCCGCGGGAAGTTCCAGTGTGACAACTGTGACAAAACGTTTCAATCTCCACGAGCATTGGGAAGTCACAAAAGCATATGCGTTCACGATGAAGCAGGTAACATTAACAATAACGATAATGAAAGAATCTTTGAATGCCCGTTTTGTTCAAAGGTGTTTGGGTCTGGTCAAGCACTCGGTGGCCATAAGAGATCTCACCTCATGCCTTCTTCGTCTTCAACCGCTAACAATTCTCCTACAAGATTGAAAGAGAGCTTCATAGATCTCAACTTGCCGGCTCCGGCTGAAGATGACGACCTTAGTGTTGTTTCAGACGCCTAA 900 0.4944 MERHKCKLCSRTFPNGRALGGHMKAHLATLPLPPKPQPLSFSSSEDEHHAPAHRESDDKALIYGLRENPKKSLRLADPGFSFPVDTGSVVQDRESETESKNPTRRRSKRTRKPVQAQNLEEPKRPKLSFMESPTEPEPLSSVSDTSPEEDVAMCLMMLSRDRWRRNKVVAVKEEEKSVENSKGLLEEEIKFRRVRGKFQCDNCDKTFQSPRALGSHKSICVHDEAGNINNNDNERIFECPFCSKVFGSGQALGGHKRSHLMPSSSSTANNSPTRLKESFIDLNLPAPAEDDDLSVVSDA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0691 299 MobiDBLite consensus disorder prediction 253 274 - -
Apr7g0691 299 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Apr7g0691 299 MobiDBLite consensus disorder prediction 259 274 - -
Apr7g0691 299 SMART c2h2final6 198 222 IPR013087 -
Apr7g0691 299 SMART c2h2final6 237 259 IPR013087 -
Apr7g0691 299 SMART c2h2final6 4 26 IPR013087 -
Apr7g0691 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 198 222 IPR013087 -
Apr7g0691 299 Gene3D Classic Zinc Finger 195 259 - -
Apr7g0691 299 SUPERFAMILY beta-beta-alpha zinc fingers 3 29 IPR036236 -
Apr7g0691 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Apr7g0691 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 237 264 IPR013087 -
Apr7g0691 299 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 299 IPR044303 GO:0006355
Apr7g0691 299 MobiDBLite consensus disorder prediction 113 130 - -
Apr7g0691 299 ProSitePatterns Zinc finger C2H2 type domain signature. 200 222 IPR013087 -
Apr7g0691 299 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 299 - -
Apr7g0691 299 MobiDBLite consensus disorder prediction 280 299 - -
Apr7g0691 299 MobiDBLite consensus disorder prediction 28 60 - -
Apr7g0691 299 SUPERFAMILY beta-beta-alpha zinc fingers 198 259 IPR036236 -
Apr7g0691 299 ProSitePatterns Zinc finger C2H2 type domain signature. 239 259 IPR013087 -
Apr7g0691 299 MobiDBLite consensus disorder prediction 73 148 - -
Apr7g0691 299 MobiDBLite consensus disorder prediction 46 60 - -
Apr7g0691 299 Pfam C2H2-type zinc finger 3 28 - -
Apr7g0691 299 Pfam C2H2-type zinc finger 237 260 - -
Apr7g0691 299 Pfam C2H2-type zinc finger 198 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0691 Apr-Chr7 13767316 13768650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0691 2 294 C2H2 Transcription Factor Family AT1G02030 39.130 1.42e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr7g0691 zf-C2H2_6 7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0691 - - gmx:100815124 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0691 7 13767316 13768650 Apr10g1604 10 28591581 28593172 PCT