LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g0690	ATGGCTTCGAATCCTCCATTTCATGTGGAGGATCAGACTGATGAGGATTTCTTTGATAAACTGGTTGAGGATGATATGGAGCCCTTTAATTCTGGCCATGATGAAGGGAATGATTCCGATGAGGCTAAAGCATTTGCGAACCTTGGCATCAGTGATGTTGATGCTACTGCATTTGAGAATTCTGATGATGCTGGTGAAAGTGGGGTTGAACTTAAAGGGGATTTGGGTACTGTGAAATCTGATGGGGGACTTGAACACGAGAGAAATTTGTTGCAATCATCTAGTTCAGTGGGAGGTGATAGTAAGATGGATCCTGGTGATGATGGGATTGGGGTGGGATCAGAATTCATGCCTGCCTCAGCTGCAAGCACGAGCGATAAAGTCACTAGTTCTGGGATTAAGGAGGTGGGTTGGAATTCTTTTCATGCTGATTCGAATGGAGGCATTGGGTTTGGTTCGTATTCTGACTTTTTCAGTGAGTTGGGAGATCAATCTGGCAATTTTCCAGGGAATGCGCATGATAATTTAAATGGTAACGTGAATCCTGGTAATGAAGTTCAGAATGATGGCTTAAATGCCTCAGTTAATTATGTGCAGTATCAAGATGGTCGAGGTTATGATGCATCTTTAGCAAATCACACAAACAAGCAAGTTGATGGCTTAAATACTTCAGTTAATTATGTACAATACCAAGAAGGTCAAGCTTATGATGCATCTTCAGAAAAGCACACCAATGGACAAGATCTGAGTAGTAGTCAGTATTGGGAGTATCTTTATCCTGGCTGGAAGTATGACCACAACACTGGGCAATGGTATCAAATAGATGGCTATAATGCAACAGCCACTACTCAGCAAAGCTCAGAAGCCAATACAGCTGTGGACTGGACTGCCCCTTCTGACGGGAAAGCAGAGATCTCTTACATGCAGCAAAGTTCTCAATCTGTTGCTGGAACTTTAGCTGAAACTAGCACAACGGAAAATGTATCTAGCTGGAGTCAGGTTTCACAAGGGAATACTGGGTATCCAGAGCATATGGTTTTTGATCCTCAGTATCCTGGTTGGTATTATGACACAATTGCCCAAGAATGGCAATCGTTGGAAACTTACAATTCAACCATTCAATCTTCTGTTCAGGGACTTGAAAATGGGCATGCTTCTACGAGTACTTTCTCACCAAATGATAATAGTTTGTATAGTGAATATAGCCAAGCTGTTAATTATGGATCACAGGGTGTTGATAGTCAGGCTGTAGATGGCAGCTGGGGTGGTTTGTATGGTGTTAACCAGCAGCAGGGGTTTGGCATGTACACAACTGAGACTGCAACTAAAATGGGGGATAATGTAGCTTCTGGTGGTAACCACCAAGCTAATCATTCATATGGTTCCAGCATTTCTGCAAACCATGATCAACAAAATACTTCTAGCTCCTTTGGATCAGTTGCATTGTACAATAAAGTAAACCATGATCATGGTTTGGCTAATGGAACTTTTGAGCCCCGAAGTTTTGGTGCCAGTGGGGACATTGTTCAACAGTTCAACTATTCAAAAACACAGTTTGGCGAACCAAAAAAATTCTCAAATGATTTTGCTGAAAATCAAAAGCCCTTTAGTTACTCCCCACAATCAATCCAGGGTGCACATCAATATTCATATGCCTCTCATGTTGGAAGATCATCTGCTGGACGTCCTGCTCATGCCCTGGTAACCTTTGGATTTGGCGGAAAACTTGTCATAATGAAAGATCCTAGTCCTCTAAGCTCATCATATGGAGGCCAGGATTCTGTACAAGGTTCTGTTTCTGTATTGAACTTGGTAGAAGTTGTCACGGGTAGCATTGATTCTACGAGCACTGGAAATGGTACTGGTGATTATTTTCGTTGTCTGAGCCAGCAATCTTTCCCAGGTCCATTGGTTGGTGGGAGTGTTGGAAGTAAGGAACTGTACAAATGGTTAGATGAGAGGATTGCACACTGTGGATCACCTGACCTGGATTATAAGAAAGGTGAAAGATTGAGACTCCTCCTTTCCTTGCTTAAAATAGCTTGTCAACATTATGGGAAACTGCGTTCTCCTTTTGGCACAGACACCATACTAAAAGAAAATGATACTCCTGAGTCAGCTGTTGCAAAACTTTTTGCATCTGCCAAGATGAGTGGCACTGAGTTCCCTCAATTTGGGATGCCGAGCCATTGCTTGCAAAATTTGCCTTCTGAGGGACAAATGAGGGCAATGGCTTCTGAGGTTCAAAATCTTCTTGTCTCTGGAAAAAAGAAGGAGGCTTTACAATGTGCCCAAGAAGGACAATTGTGGGGACCTGCACTTGTTCTTGCCTCGCAACTTGGTGATCAGTTCTATGTTGATACAGTGAAGCAAATGGCACTTCACCAGCTGGTTGCAGGGTCACCTTTGCGCACATTATGCCTTCTAATTGCGGGGCAACCAGCTGAAGTATTCTCTACTGATACCTCAATTAGTGGGCTTCCTGGTGCTTCCAACATGCCTCAACAATCTCCACAGGTTGGAACCAATGGTATGCTTGATGATTGGGAGGAGAATCTGGCTGTAATTACTGCAAACAGAACCAAAGGTGATGAACTTGTAATCATTCACCTTGGTGATTGCTTGTGGAAGGAAAGAAGTGAGATTACTGCTGCACACATCTGCTATTTAGTTGCTGAAGCAAATTTTGAGTCATACTCAGACAGTGCAAGACTCTGTCTATTAGGAGCAGATCACTGGACATGTCCCCGAACTTATGCTAGTCCCGAGGCTATCCAGAGGACCGAGTTATATGAATATTCGAAGGTGGTTGGAAACTCTCAGTTTACTCTGCACCCATTTCAACCGTATAAGCTTATATATGCATATATGCTAGCTGAAGTGGGAAAGGTTTCTGACTCATTGAAGTACTGCCAAGCATTACTGAAATCCTTGAAAACTGGTCGTGCTCCAGAAGTAGAAACATGGAAACAGTTAGCATTATCTCTTGAGGAGAGAATTAGAACTCACCAACAGGGTGGATATGCTGCAAATTTGGCTCCTGCAAAATTAGTTGGCAAATTGCTCAACTTTTTTGATAGTACCGCACATCGAGTTGTTGGTGGTTTACCGCCACCGCCCCCTGCTCCATTATCATCACAAGCAACTGTTAATGGAAGTGAACAACCTTATCAGAATATGGCACCCAGAGTATCCTCCAGCCAGTCAACAATGGCCATGTCATCGTTAATCCCATCTGCTTCAATGGAACCCATAAGTGGGTGGACAGCTGACAATAATAGAATGGCAAAGCCTAATAGAAGTGTTTCAGAGCCTGATATTGGTAGAACCCCAAGACAGGAAACAACCTCTCCTAATGCACAAGGAAAAGCACAAGTGTCAGGGGGTACATCTCGCTTTTCCCGTTTTGGTTTTGGCTCACAACTTTTGCAAAAGACTGTAGGGCTAGTCTTGAGACCTCGCTCTGGTCGACAGGCTAAATTGGGTGAGAAAAACAAGTTCTATTATGATGAAAAGCTGAAGAGATGGGTGGAAGAAGGTGCTGAACTGCCAACTGAAGAAGCTGCACTGCCGCCACCACCAACAACTGCTGCTTTCCAGAATGGTTCAACTGAATACAACTTGAAATCTGCATTGAAGACTGAAAGTTCACCTCCTATTGAAGGCCCTAACTTGAGAACTTCTAGCCCTGAACTTAGTCCAGGGATGCCACCGATGCCACCCAGCTCAAATCAATTCTCTGCCCGGGGTCGTTTGGGTGTTCGGGCAAGGTATGTTGACACCTTCAACCATGGTGGTGGAAGCTCACCCAACTTGTTTCAATCCCCTTCTGTTCCATCTGTGAAACCTGCTCTTGCTGCCAATGCAAAGTTTTTCATTCCTACTCCCGCACCATCGTCAAATGAGCAGACTATGGAGGCTATTGCTGAAACCAATCAAGAAGATAGTGTAGCAAATGAAGATCCTTCCACATCTGCCACGAATGATTGGTCGTACCAATCCCCCAAACAAGCATTGCCAATAGGCATGCAAAGGTTTCCAAGCATGGGTAACATCCCAAAACAAGGAGCGAAGGGAGGCAATAACTCTAATTTTGCTCATTCACGTAGAGCAGCTTCATGGAGCGGGAGTTTTAATGATTCATTTAGCCCTCCAAAAATGGGTGAAATCAAGCCTCTAGGGGAAGCTTTGGGCATGCCACCGTCAACATATATGCCTGATCAGTCTTTAATGCATACACCTATGAAAAGTAGCAGTTTTGGGGAAGATCTTCAAGAGGTTGAACTTTGA	4290	0.4373	MASNPPFHVEDQTDEDFFDKLVEDDMEPFNSGHDEGNDSDEAKAFANLGISDVDATAFENSDDAGESGVELKGDLGTVKSDGGLEHERNLLQSSSSVGGDSKMDPGDDGIGVGSEFMPASAASTSDKVTSSGIKEVGWNSFHADSNGGIGFGSYSDFFSELGDQSGNFPGNAHDNLNGNVNPGNEVQNDGLNASVNYVQYQDGRGYDASLANHTNKQVDGLNTSVNYVQYQEGQAYDASSEKHTNGQDLSSSQYWEYLYPGWKYDHNTGQWYQIDGYNATATTQQSSEANTAVDWTAPSDGKAEISYMQQSSQSVAGTLAETSTTENVSSWSQVSQGNTGYPEHMVFDPQYPGWYYDTIAQEWQSLETYNSTIQSSVQGLENGHASTSTFSPNDNSLYSEYSQAVNYGSQGVDSQAVDGSWGGLYGVNQQQGFGMYTTETATKMGDNVASGGNHQANHSYGSSISANHDQQNTSSSFGSVALYNKVNHDHGLANGTFEPRSFGASGDIVQQFNYSKTQFGEPKKFSNDFAENQKPFSYSPQSIQGAHQYSYASHVGRSSAGRPAHALVTFGFGGKLVIMKDPSPLSSSYGGQDSVQGSVSVLNLVEVVTGSIDSTSTGNGTGDYFRCLSQQSFPGPLVGGSVGSKELYKWLDERIAHCGSPDLDYKKGERLRLLLSLLKIACQHYGKLRSPFGTDTILKENDTPESAVAKLFASAKMSGTEFPQFGMPSHCLQNLPSEGQMRAMASEVQNLLVSGKKKEALQCAQEGQLWGPALVLASQLGDQFYVDTVKQMALHQLVAGSPLRTLCLLIAGQPAEVFSTDTSISGLPGASNMPQQSPQVGTNGMLDDWEENLAVITANRTKGDELVIIHLGDCLWKERSEITAAHICYLVAEANFESYSDSARLCLLGADHWTCPRTYASPEAIQRTELYEYSKVVGNSQFTLHPFQPYKLIYAYMLAEVGKVSDSLKYCQALLKSLKTGRAPEVETWKQLALSLEERIRTHQQGGYAANLAPAKLVGKLLNFFDSTAHRVVGGLPPPPPAPLSSQATVNGSEQPYQNMAPRVSSSQSTMAMSSLIPSASMEPISGWTADNNRMAKPNRSVSEPDIGRTPRQETTSPNAQGKAQVSGGTSRFSRFGFGSQLLQKTVGLVLRPRSGRQAKLGEKNKFYYDEKLKRWVEEGAELPTEEAALPPPPTTAAFQNGSTEYNLKSALKTESSPPIEGPNLRTSSPELSPGMPPMPPSSNQFSARGRLGVRARYVDTFNHGGGSSPNLFQSPSVPSVKPALAANAKFFIPTPAPSSNEQTMEAIAETNQEDSVANEDPSTSATNDWSYQSPKQALPIGMQRFPSMGNIPKQGAKGGNNSNFAHSRRAASWSGSFNDSFSPPKMGEIKPLGEALGMPPSTYMPDQSLMHTPMKSSSFGEDLQEVEL*	1430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	23	41	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1211	1240	-	-
	Apr7g0690	1429	Gene3D	-	561	987	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	57	126	-	-
	Apr7g0690	1429	CDD	ACE1-Sec16-like	633	1004	-	-
	Apr7g0690	1429	PANTHER	SECRETORY 16, ISOFORM I	1	1424	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	448	471	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	22	42	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1046	1099	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1406	1420	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1311	1333	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1355	1382	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1106	1129	-	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1035	1129	-	-
	Apr7g0690	1429	Pfam	Sec23-binding domain of Sec16	748	1007	IPR024298	-
	Apr7g0690	1429	MobiDBLite	consensus disorder prediction	1351	1429	-	-
	Apr7g0690	1429	PANTHER	RGPR-RELATED	1	1424	IPR024880	GO:0006914\|GO:0048208
	Apr7g0690	1429	Pfam	Vesicle coat trafficking protein Sec16 mid-region	565	686	IPR024340	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr7g0690	Apr-Chr7	13740038	13748001	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr7g0690	K20353		-	gmx:100795053	2326.98

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr7g0690	7	13740038	13748001	Apr10g1716	10	29990054	29993744	PCT