Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0687 ATGGCTCCAATCTTCATCTCACTGCAAGTACTTGTGGTCTTCACTTGCATATTTCATGCAGCAACGGTGACGTGCACACGCCACCACAACAGTACCTTCAAAATATTGTCTTCCACAAACTTCTCCAAGCATTGGATTGGACCCATCGGTCACCGCGTAATCACCGTTGACATTAACGGCGGTGGCCACTTCCGTTCCGTCCAAGACGCCGTCAATGCCGTCCCAGACAACAACAGAAAGAACGTCCTCATTCAAATCAGCGCCGGATGCTACGTAGAAAAGGTGGTAGTGCCCGTGACGAAGCCGTACATAACATTTCAGGGCGCGGGTAAGGAAGTGACAGTGATAGAATGGCATGATCGAGCGAGTGACCCTGGTCCCAACGGCCAACAACTGCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGCTATTTTTCTGCTAGGAATATCAGCTTCAAGAACACAGCTCCTGCACCAATGCCGGGGATGCAGGGATGGCAGGCGGCGGCGTTTCGCATATCGGGGGACAAAGCATACTTCTCCGGCTGTGGTTTCTACGGTGCACAAGACACACTTTGCGACGATGCTGGCCGGCATTACTTCAAGGAATGCTACATTGAAGGCTCCATTGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCGAGTTGCACTCAATAGCAACGAGGTTCGGTTCCATAGCAGCCCACGATAGGAAATACCCAGACGAGAAGACAGGCTTTGCTTTCGTACGATGCAGGGTAACGGGTACAGGCCCGCTCTATGTGGGGCGAGCAATGGGCCAATACTCAAGAATTGTCTACTCTTACACTTATTTCGATGACATTGTTGCACATGGCGGTTGGGATGATTGGGACCATGCAGACAACAAAACCAAGACTGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAAGCCGTACGTGGGGTCTCATGGGCAAGAGATTTAGATTTCGAATCCGCACATCCATTTCTCGTGAAGAGCTTCGTCAATGGCAGGCACTGGATCGCTCCAACTGATGCTTAG 1068 0.5056 MAPIFISLQVLVVFTCIFHAATVTCTRHHNSTFKILSSTNFSKHWIGPIGHRVITVDINGGGHFRSVQDAVNAVPDNNRKNVLIQISAGCYVEKVVVPVTKPYITFQGAGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKYPDEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKTKTVFFGVYKCWGPGAEAVRGVSWARDLDFESAHPFLVKSFVNGRHWIAPTDA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0687 355 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Apr7g0687 355 SUPERFAMILY Pectin lyase-like 51 353 IPR011050 -
Apr7g0687 355 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 354 - -
Apr7g0687 355 Pfam Pectinesterase 54 346 IPR000070 GO:0030599|GO:0042545
Apr7g0687 355 PANTHER PECTINESTERASE 68-RELATED 9 354 - -
Apr7g0687 355 Gene3D - 50 355 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0687 Apr-Chr7 13721778 13725752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0687 6 355 Carbohydrate Esterase AT5G47500 74.929 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0687 - - gmx:100816190 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0687 7 13721778 13725752 Apr7g0687 7 13721778 13725752 ECH