Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0671 ATGGACTCTCATGTTTCTCCTGTTCTTACTGATCCTGTACCTGTAAACAAGTCAAGACTAGGAATCCATTCTAGTCTTCTAACTTATTCCCAGCCAGATTCACCACATTCCTCAGGCAAGTATTCAAGAACTGGGTCAAGAAAAAGTGCAGCGAATCTTGATGATGTTCGGTCCAATGATTGGTTGGATGCAATGAAGGCTTCTTCACCTCCAAGGAAGAAGTTACTTAAAGGTTCCATTGCTCAGGTTGCTTCAATTGACAAAGACATTGATGACTTTCTCTCATTCATGCTTGATTATCCTTCAGCACTAGACTCTTTCGAGAATATTATTGACCGTGCAAAGAATAAGAAGATTGCAATGTTTCTAGATTATGATGGCACTCTTTCGCCAATAGTAGATGACCCAGACTGTGCCCTTATGTCTGAAGCTATGCGTGCCACTGTGAGAAGCATGGCAAGGTATTTTCCCACGGCAATTATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATCTAGTTAAACTAACGGAACTCTACTATGCTGGTAGTCATGGAATGGACATTATTGGCCCCTTTCGTCAAACTCCCTCCAATAACCTTCCAAATTGTGTCAAATCTACTGACCATCAGGGAAAGGAGATAACTCTCTTTCAACCTGCTAGAGAATTCCTGCCCATGATTGACGAGGTTTTTAGAACCCTCGTCGAGATTACTGAAGATATAAAGGGTGCAAAAGTTGAAAATCACAAGTTTTGCGTTTCTGTACATTACCGTAACGTCGAAGAGAATAATTGGTCCACAATTGGACAACGTGTCCATGATGTGTTGAAAAATTACCCTCGTTTACGTTCCACCCACGGACGGAAGGTTTTAGAGGTCCGTCCTGTGATTGACTGGAACAAAGGAAAAGCGGTTGAATTTTTACTTGAATCTCTAGGGTTAAATGATTGGGATGATGTGCTTCCCATCTACATTGGAGATGATAAAACCGATGAAGATGCTTTCAAGGTTCTGCACGAGGGCAATCGAGGTTGTGGGATTTTGGTTTCATCAACGAAGAAAGAAAGCAACGCTTTCTACTCTCTCCGAGACCCGACTGAGGTCATGAAATTTCTCCAGCTTCTGGTGAATTGGAAGAGGCAAGAAGAAAGGAAACATGGAGAGAAGTAA 1170 0.4214 MDSHVSPVLTDPVPVNKSRLGIHSSLLTYSQPDSPHSSGKYSRTGSRKSAANLDDVRSNDWLDAMKASSPPRKKLLKGSIAQVASIDKDIDDFLSFMLDYPSALDSFENIIDRAKNKKIAMFLDYDGTLSPIVDDPDCALMSEAMRATVRSMARYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPFRQTPSNNLPNCVKSTDHQGKEITLFQPAREFLPMIDEVFRTLVEITEDIKGAKVENHKFCVSVHYRNVEENNWSTIGQRVHDVLKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLNDWDDVLPIYIGDDKTDEDAFKVLHEGNRGCGILVSSTKKESNAFYSLRDPTEVMKFLQLLVNWKRQEERKHGEK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0671 389 MobiDBLite consensus disorder prediction 27 50 - -
Apr7g0671 389 Pfam Trehalose-phosphatase 122 365 IPR003337 GO:0003824|GO:0005992
Apr7g0671 389 CDD HAD_TPP 120 370 - -
Apr7g0671 389 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 4 385 - -
Apr7g0671 389 SUPERFAMILY HAD-like 120 380 IPR036412 -
Apr7g0671 389 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 4 385 IPR044651 GO:0004805|GO:0005992
Apr7g0671 389 Gene3D - 219 389 IPR023214 -
Apr7g0671 389 Gene3D - 119 198 IPR023214 -
Apr7g0671 389 TIGRFAM T6PP: trehalose-phosphatase 117 376 IPR003337 GO:0003824|GO:0005992
Apr7g0671 389 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 340 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0671 Apr-Chr7 13486838 13489259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0671 115 375 Trehalose Biosynthesis Gene Families AT1G70290 27.174 9.48e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0671 K01087 - tcc:18606311 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0671 7 13486838 13489259 Apr7g0671 7 13486838 13489259 ECH