Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0668 ATGAATACATTTTCACATGTTCCTCCTGGCTTTCGTTTCCATCCCACTGATGAAGAACTTGTTGATTACTACCTTAGGAAAAAGGTAGCTTCTAAAAGAATTGATCTAGATGTAATAAAAGATGTCGATCTCTATAAAATTGAGCCGTGGGATCTTCAAGAATTATGCAAAATAGGAACAGATGAACAAAATGAATGGTATTTCTTTAGTCATAAAGACAAGAAGTACCCAACTGGCACTCGCACCAATAGAGCTACAAAGGCGGGATTCTGGAAAGCTACGGGAAGGGACAAAGCAATTTACTCTAGGCATTGCCTTATTGGCATGAGAAAGACTCTGGTGTTTTACAAAGGAAGAGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTACCGATTGGAAACTAATGAAAATGGAACTCCTCAGGAAGAAGGTTGGGTTGTATGTAGAGTGTTCAAGAAACGAATGACAACAGTGAGGAAAATGGGAGAGTATGAGTCACCCTGTTGGTATGAGGACCAAGTCTCATTCATGCAAGAGCTTGAATCCCCGAGGCGAATTTCTCACCCTTATGCACCATACCACCAGCACTACCCCTGCAAGCAGGAGTTGGAATTGCAATACAATATACCTCATGACGCTTTCCTCCAACTTCCACAACTAGAAAGTCCCAAAGTTCCTCACTCTGCAGCCAGTTTGAGTTGTAACTCAGTTGTTCCTTTTGCCTACGGTAGCAATAATAATGGAAACGCTATGCAATCCTCCTCACTCACTCAAGAAGAACACATACAACAACATTGCCAGCAACAAAATCTACCATTTCTTTATGGTAGCAATGATCAAGCAGTGGATCAAGTTACAGATTGGCGAGTACTTGACAAATTCGTTGCTTCTCAGCTCAGTCACGATCAACATGTTTCCAAGGAAACCAGCTTTTCTGATGTGGTTGATCAAATTACTTTGCTTCCAAATGGATCCAAGAAACCAGAAATTGGCCAGGAATATGCTTCAACATCCACCTCCAGTTGCCAGATTGACCTGTGGAAGTGA 1056 0.4176 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRMTTVRKMGEYESPCWYEDQVSFMQELESPRRISHPYAPYHQHYPCKQELELQYNIPHDAFLQLPQLESPKVPHSAASLSCNSVVPFAYGSNNNGNAMQSSSLTQEEHIQQHCQQQNLPFLYGSNDQAVDQVTDWRVLDKFVASQLSHDQHVSKETSFSDVVDQITLLPNGSKKPEIGQEYASTSTSSCQIDLWK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0668 351 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Apr7g0668 351 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Apr7g0668 351 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Apr7g0668 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 321 - -
Apr7g0668 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 321 - -
Apr7g0668 351 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0668 Apr-Chr7 13434893 13439226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0668 1 351 NAC Transcription Factor Family AT1G12260 56.510 2.57e-145 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr7g0668 NAM 5.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0668 - - gmx:100779370 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0668 7 13434893 13439226 Apr7g0668 7 13434893 13439226 ECH