Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0663 ATGGGGAGGCAACCTTGCTGTGACAAACTTGGGGTGAAGAAAGGTCCATGGACTGCTGAGGAAGACAAGAAACTCATCAACTTCATTCTCACCAATGGCCAGTGTTGTTGGCGTGCGGTGCCCAAGCTTGCTGGCCTTCGCCGCTGTGGTAAAAGTTGTCGTCTTCGTTGGACTAATTATCTTCGCCCTGACTTGAAGAGAGGGCTCCTCACAGAGGCTGAAGAACAGCTTGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCTAGGTTGCCTGGAAGGACAGACAACGAGATTAAAAATCACTGGAACACCCACGTCAAGAAAAAACTCCTTAAGATGGGTATTGATCCTGTTACTCATGAACCCGTTAACAAACAAGGCACATCAGAGCATTTGTCACAAGTTGATAGCATCCATCAGGTTAAGGAAAATGATGGGGTTCTCAATTCAGAAGTCAATTCAAGCACTGAAAATTCTTCAGGGGAAGAATCCCTTTTGCTGGATAGCATTTGCAGCGATGAATCTCTAATGAACAGTCTGTGGCAGGATGAAACTCCTCTGATGGACATATTATGGGACACTGCACCTGAATCATATAATACAAATAATGGAATGGGATTGCCAATATGGGAGGACAATTGTTCTTGGTTGTTGGAGTGCCAAGACTTTGGTATTCATGATTTTGGTTTTAATTGTTTCAGCGAGATTGAGTCAACTGCATCGCAAACTATAGGAGTAGAGAGAAAAGGGCATCAGGATGGACTACATTTGGTGAAGTGA 798 0.4461 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHVKKKLLKMGIDPVTHEPVNKQGTSEHLSQVDSIHQVKENDGVLNSEVNSSTENSSGEESLLLDSICSDESLMNSLWQDETPLMDILWDTAPESYNTNNGMGLPIWEDNCSWLLECQDFGIHDFGFNCFSEIESTASQTIGVERKGHQDGLHLVK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0663 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Apr7g0663 265 CDD SANT 16 61 IPR001005 -
Apr7g0663 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Apr7g0663 265 Gene3D - 12 67 - -
Apr7g0663 265 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Apr7g0663 265 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Apr7g0663 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Apr7g0663 265 Gene3D - 71 147 - -
Apr7g0663 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Apr7g0663 265 SMART sant 13 63 IPR001005 -
Apr7g0663 265 SMART sant 66 114 IPR001005 -
Apr7g0663 265 CDD SANT 71 112 IPR001005 -
Apr7g0663 265 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 231 - -
Apr7g0663 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Apr7g0663 265 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0663 Apr-Chr7 13369265 13370720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0663 1 259 MYB Transcription Factor Family AT4G12350 56.164 1.76e-99 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr7g0663 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0663 K09422 - gmx:100800360 441.425