Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0658 ATGAATTCCGTTCATCTCTTCATTTCTCTGTTTCTATTGGTTGCATTTCCCAGTCTGCAGAAGGTTCTTGGAAATGCAGAGGTTAGAGCTCTGATGGACTTGAAGGCCTCTCTGGACCCAGAGGGCAAGATCCTTAGCTCGTGGATCAGTGATGGTGATCCATGCAGTGGCTTGTTCCAAGGGATTGCGTGCAACGAGCACAGGAAAGTGGCCAACATCTCCTTGCAGGGAAAGGGTCTTTCGGGTTGGCTCTCTCCAGCAGTGGCTGAACTCAAATGCTTGTCGGGCTTATACTTGCATTACAACAATCTTTCTGGTGAGATACCCCCACAGATTTCAAATCTCACTGATTTGGTTGATCTCTATCTTGATGTGAATAGTCTATCTGGAACCATTCCTCCTGAGGTCGGCAACATGGCTAGTCTCCAAGTGCTGCAACTGGCTGACAACCAGTTGGTTGGGAATATACCTACTCAGATGGGTTCCTTAAAGCAGCTTAGTACTCTTGCTTTGCAGTACAACAAATTAACTGGTCAAATTCCTCTTAGCTTGGGGAACTTGGAGAGGCTAAGCAGGCTAAATTTGAGCTTCAACAACTTTAGTGGTATGATTCCGGCAACACTAGCACATAATGAACATTTGGAAGTTCTAGACATTCAGAACAATTCTCTATCAGGAATTGTTCCTTCGGCATTGAAAAGACTTGGGGAAGCATTCCAAGGTGCAAACAACCCAGGTTTGTGTGGATTTGGGTTTTCAACCTTGAGAGTTTGCAACAAAGATCAAGACTTAAAAGTCAATCATATTGACACCTCAGATCAAGGCCAACACAAAAATAGTAATCCTGCTAAGGCGCTCCCTGAGCCTGCAAATCTCCAGTGGCATTGTAACCAAATCCATTGCTCAAAATCAGGAAGGTTTCCTCAAACTGTCATCACAGCAGGTGTTATAATCATTACTCTCACATTAATATGTGCTGGATTTTTTACATTTGTCAAATACCGCCGTCAAAAGCAGAGGATTAGTAATACATCAAGTTCTTCTGAAGGGAAACTTAGTCCTGACCAGCCTAAAGAGTTCTACAGAAAAAGTCCATCTGCCCTTGTTAATCTTGAGTACTATAATGGATGGGATCCATTGTCTAATGGTCAAAATGCTGAAGCTGGGGGATTATCCAATGAATATCTAAATCAATTTAGGTTTAATGTGGATGAGGTTGAATCTGCAACACAGTACCTATCCGAAGCTAATATATTGGGCAAGAGCAAATTCTCAGCAGTTTATAAAGGGGTTCTCAGAGATGGTTCTCTTGTGGCTATTAGAAGCATTAGCGTGACATGTTGCAAAACTGAGGAAGCTGAATTTGTAAAGGGGTTGAGCTTATTAACCTCTTTGAGACATGAAAACCTTGTTAGGTTGAGAGGTTTTTGTTGCTCAAGTAGTAGAGGTGAGTGTTACCTTATCTATGACTTTGTCACCATGGGTAACCTGTCTCAATATCTTGACATAGAAGATGGAAGTGGCCATGTGCTTGAGTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAGGGTATTGGATATCTTCATAGCAATGAAGCAAGCAAACCTACCATAGTTCACCAGAATATTTCAGTGGAAAATGTTCTCCTCGATCAACAGTTCAACCCATTGATCATGGATGCTGGACTCCCCAAGCTTCTTGCTGATGATGTGGTTTTCTCAGCACTAAAAGTAAGTGCCGCCATGGGATACCTAGCTCCCGAATACATTACCACTGGACGCTTTACTGAGAAGAGTGACATATACGCATTTGGGGTTATTGTTCTTCAAGTTCTATCTGGCAAGAAGGCAATAGGTAGTTCAATAAGAATGGCAGTTGAGTCTTTTAGATTTGATGATTCTGTTGACACAAACCTTAGGGGAAGATATTCTAAATCCGAAGCGGAGACGCTTTCAAAGCTTGCAATACAATGTACTCATGAGCTTCCTGACCAAAGGCCAACAATGGTGGATGTGATTCAGGAGCTAAGTGTGTTTCCTGCTCATTTATAA 2058 0.4237 MNSVHLFISLFLLVAFPSLQKVLGNAEVRALMDLKASLDPEGKILSSWISDGDPCSGLFQGIACNEHRKVANISLQGKGLSGWLSPAVAELKCLSGLYLHYNNLSGEIPPQISNLTDLVDLYLDVNSLSGTIPPEVGNMASLQVLQLADNQLVGNIPTQMGSLKQLSTLALQYNKLTGQIPLSLGNLERLSRLNLSFNNFSGMIPATLAHNEHLEVLDIQNNSLSGIVPSALKRLGEAFQGANNPGLCGFGFSTLRVCNKDQDLKVNHIDTSDQGQHKNSNPAKALPEPANLQWHCNQIHCSKSGRFPQTVITAGVIIITLTLICAGFFTFVKYRRQKQRISNTSSSSEGKLSPDQPKEFYRKSPSALVNLEYYNGWDPLSNGQNAEAGGLSNEYLNQFRFNVDEVESATQYLSEANILGKSKFSAVYKGVLRDGSLVAIRSISVTCCKTEEAEFVKGLSLLTSLRHENLVRLRGFCCSSSRGECYLIYDFVTMGNLSQYLDIEDGSGHVLEWSKRVSIIKGIAKGIGYLHSNEASKPTIVHQNISVENVLLDQQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKKAIGSSIRMAVESFRFDDSVDTNLRGRYSKSEAETLSKLAIQCTHELPDQRPTMVDVIQELSVFPAHL* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0658 685 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Apr7g0658 685 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 680 - -
Apr7g0658 685 SUPERFAMILY L domain-like 28 234 - -
Apr7g0658 685 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 680 - -
Apr7g0658 685 Pfam Leucine rich repeat 189 235 IPR001611 GO:0005515
Apr7g0658 685 Gene3D Ribonuclease Inhibitor 26 139 IPR032675 -
Apr7g0658 685 Pfam Protein tyrosine and serine/threonine kinase 416 678 IPR001245 GO:0004672|GO:0006468
Apr7g0658 685 Gene3D Phosphorylase Kinase; domain 1 381 491 - -
Apr7g0658 685 SUPERFAMILY Protein kinase-like (PK-like) 393 680 IPR011009 -
Apr7g0658 685 SMART LRR_typ_2 139 163 IPR003591 -
Apr7g0658 685 SMART LRR_typ_2 187 210 IPR003591 -
Apr7g0658 685 SMART LRR_typ_2 212 234 IPR003591 -
Apr7g0658 685 SMART LRR_typ_2 91 115 IPR003591 -
Apr7g0658 685 Gene3D Ribonuclease Inhibitor 140 260 IPR032675 -
Apr7g0658 685 ProSiteProfiles Protein kinase domain profile. 413 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0658 685 Gene3D Transferase(Phosphotransferase) domain 1 493 681 - -
Apr7g0658 685 CDD STKc_IRAK 419 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0658 Apr-Chr7 13327346 13330246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0658 6 526 Miscellaneous Gene Families AT4G22730 57.278 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Apr7g0658 PK_Tyr_Ser-Thr 8.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0658 - - gmx:100777169 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0658 7 13327346 13330246 Apr7g0658 7 13327346 13330246 ECH