Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0647 ATGGATCCTATTACAGCACACGGGCATTCATCACTTCCTCCTCCTTTCCACACATCAAGAGATCTCCATCTGCACCATCAACACCAGTTCCACGCGTTGCAACAAAGCACAGAAGATGAACAAAGCGGAAGCAGTGGAGGCCTAAACCTCGCACACAAAAGGGAGCGCGAAGAAAACAACAACAACAGTAGCGAAGGAAAAGAAGGTGGTGGCTCAGGTGAAACCGAAATCACAAGAAGACCACGAGGAAGACCCGCGGGATCGAAGAACAAACCGAAGCCACCCATCATCATCACGCGCGACAGCGCAAACGCGCTAAAAACGCACGTGATGGAGGTGGCTGATGGCTGTGACATCGTCGAGAGTGTCTCCAACTTCGCTAGACGCCGCCAAAGAGGGGTTTGCATCATGAGCGGCACTGGAACCGTCACCAATGTAACTCTCAGGCAACCCGCATCTTCCGGTGCCGTGGTCACTCTCCATGGAAGGTTCGAGATCTTGTCCCTCGCCGGATCATTCCTTCCACCGCCGGCGCCACCGGCTGCTTCCGGTTTGACCATATATTTAGCCGGTGGACAAGGGCAGGTTGTAGGGGGAAGTGTTGTAGGAGCACTCATTGCTTCGGGTCCTGTGGTTATTATGTCAGCTTCTTTTAGCAACGCTGCTTATGAGAGACTCCCTTTGGAAGATGAAGACCCTTCGGTGCCCCTTCAAGGAGGTTCTATGGGGTCACCCGGTGCTGGTGGTGGTGCTGGTGGGGGAGTTGGTCAACAACAGCCACCTCAGCAACAGACGCAGCTTTTGGGGGATGCCACTGCTCCTCTTTTTCATGGTTTGAATCCCAATCTTCTCAATTCTGTTCAGATGCCGTCCGAGACATTCTGGGCAACTGGTCGCTCTCCGTACTGA 909 0.5358 MDPITAHGHSSLPPPFHTSRDLHLHHQHQFHALQQSTEDEQSGSSGGLNLAHKREREENNNNSSEGKEGGGSGETEITRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPSVPLQGGSMGSPGAGGGAGGGVGQQQPPQQQTQLLGDATAPLFHGLNPNLLNSVQMPSETFWATGRSPY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0647 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 220 IPR005175 -
Apr7g0647 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 302 IPR014476 GO:0003680
Apr7g0647 302 MobiDBLite consensus disorder prediction 230 264 - -
Apr7g0647 302 MobiDBLite consensus disorder prediction 29 48 - -
Apr7g0647 302 CDD DUF296 107 174 IPR005175 -
Apr7g0647 302 PIRSF ESCAROLA 17 302 IPR014476 GO:0003680
Apr7g0647 302 ProSiteProfiles PPC domain profile profile. 103 241 IPR005175 -
Apr7g0647 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 302 - -
Apr7g0647 302 MobiDBLite consensus disorder prediction 1 97 - -
Apr7g0647 302 Gene3D - 106 233 - -
Apr7g0647 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0647 Apr-Chr7 13195292 13196200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0647 1 302 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 55.425 3.13e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0647 - - gmx:100781436 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0647 7 13195292 13196200 Apr7g0647 7 13195292 13196200 ECH