Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0643 ATGAGAAGACACCGACAAATTCATCTCTCTCATGCTCTGTTGTTTGCCATTCTCTCTTTGCTTTCGCTTGTTGTGACAGTGTCACCAGCAACTGAGAAGGAAATTTTGCTTCAATTCAAGGGTAACATCACGGATGATCCACGCAACAGCTTGAGTTCGTGGGTTTCTAGTGGAAACCCGTGCCATGATTACAAAGGTGTTTCTTGTAACTCGGAAGGATTTGTGGAAAGAATCGTGCTCTGGAACACTAGCTTGGTTGGAGTGCTGTCTTCTTCATTGGCGGGGTTGAAGAGGCTGAGGACATTGACATTATTCGGGAATCGCTTCTCGGGTAATATCCCAGAAGGTAACAAGTTCACCGATTTGGCCCCATTCAACATCCTTGGAATGCAAAATCTTACCTATTTCAATATATCTTATAATGGGTTTGGAGGAAATATTCCTGAGATCACTGCCTGCAGTGAGAGATTGGAAATCTTTGATGCTTCGGGGAATTCTTTGGATGGGGAGATCCCCTCCAGCATAACTAGATGCAAGAACTTAAAGCTCTTGGCCCTGGAGTTGAATAGGCTCAAGGGGAATATCCCAGTTGATATTCAGGAGTTGCGAGGACTGTTTGTCATCAAGTTGGGTAATAACTCCATTGGTGGAAAGATTCCCAAGGGCTTTGGTAACATTGAGCTACTTGAATTGCTGGATTTGCACAATTTAAACCTCATTGGCGAAATTCCAGATGATATAAGCAATTGCAAGCTTCTTCTTGGGCTGGATGTTTCTGGTAACAACTTAGAAGGCGAGATTCCTCAGAACCTTTACAAAATGACCAACCTGGAATCCCTTGACCTACATCATAACCAGCTTAATGGAAGCATTCCTCCAAGCCTAGGAAACCTATTAAGGATCCAGAACCTAGATCTGTCACATAATTCACTTTCTAGCTCAATCCCTCCTTCCCTTGGAAATTTAAAAAACTTGACACATTTTGATCTCTCATTCAATAATCTCTCTGGCCTTATTCCTGATATTGCAACCATACAGCGATTTGGTGCAGCTGCATTTTCCAATAATCGTTTTCTTTGCGGTGCTCCTTTGGACAGCCCTTGCACAGTAAATGGAACTAGATTGCCTCCAGCTCCTGGTAAGACTAAAGTTCTAAGTGTTTCGGCAATTGTTGCAATTGTAGCTGCAGCCGTAATTCTTACTGGGGTTTGTTTGGTGACCATCATGAATATGAGGACTCGTGGTAGAAAAAGAGAAGATGATCAGATTATGATTGTTGAGAGCACGCCTCTTGGATCAACAGAATCAAATGTTATAATTGGAAAGTTGGTTCTCTTCAGCAAAACTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACAAAAGCATTGCTTGACAAAGAGTCTTTGATAGGTGGTGGATCAATTGGCACAGTCTACAGAACTGATTTTGATGGCGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCAGAAATCAAGAGGAATTTGAACAAGAAATTGGGCGACTGGGCAACCTTCAACACCCTAATTTAGTTGCTTTTCAAGGTTATTATTGGTCCTCTTCAATGCAGTTGATTCTATCAGAGTTTGTCACAAATGGGAATCTCTATGATAATTTACATGGGTTTGGCTATCCTGGAACCAGCACTAGTAGAGGTAATAGGGAATTGTATTGGTCAAGAAGGTTCCAAATTGCACTGGGAACCGCAAGAGCCCTTGCCTATCTCCACCATGACTGTAGACCTCCAATTCTTCACCTCAACATTAAATCCTCCAACATACTCCTAGATGAGAAGTATGAAGCTAAGTTGTCTGATTATGGATTAGGAAAGTTACTTCCCATTTTGGATAATTACGGTCTAACCAAATCCCACAATGCGGTTGGATACGTTGCACCAGAGTTGGCTCAAAGCCTTAGGCAAAGTGAGAAATGTGATGTTTATAGTTTTGGAGTCATTCTTTTGGAGCTGGTTACAGGGAGGAAGCCTGTAGAAAGTCCAACCACAAATGAGGTGGTGGTTTTGTGTGAATATGTAAGAGGCTTGTTGGAGAGTGCCTCGGCTTCAAATTGCTTTGACAGGAATTTACTGGGCTTTGCTGAGAACGAATTAATTCAGGTTATGAGATTGGGGCTAATTTGTACTTCGGAGGATCCTTTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTCGAGTCCATTAGAAATGGATTGGAATCCTAG 2259 0.4236 MRRHRQIHLSHALLFAILSLLSLVVTVSPATEKEILLQFKGNITDDPRNSLSSWVSSGNPCHDYKGVSCNSEGFVERIVLWNTSLVGVLSSSLAGLKRLRTLTLFGNRFSGNIPEGNKFTDLAPFNILGMQNLTYFNISYNGFGGNIPEITACSERLEIFDASGNSLDGEIPSSITRCKNLKLLALELNRLKGNIPVDIQELRGLFVIKLGNNSIGGKIPKGFGNIELLELLDLHNLNLIGEIPDDISNCKLLLGLDVSGNNLEGEIPQNLYKMTNLESLDLHHNQLNGSIPPSLGNLLRIQNLDLSHNSLSSSIPPSLGNLKNLTHFDLSFNNLSGLIPDIATIQRFGAAAFSNNRFLCGAPLDSPCTVNGTRLPPAPGKTKVLSVSAIVAIVAAAVILTGVCLVTIMNMRTRGRKREDDQIMIVESTPLGSTESNVIIGKLVLFSKTLPSKYEDWEAGTKALLDKESLIGGGSIGTVYRTDFDGGISIAVKKLETLGRIRNQEEFEQEIGRLGNLQHPNLVAFQGYYWSSSMQLILSEFVTNGNLYDNLHGFGYPGTSTSRGNRELYWSRRFQIALGTARALAYLHHDCRPPILHLNIKSSNILLDEKYEAKLSDYGLGKLLPILDNYGLTKSHNAVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPTTNEVVVLCEYVRGLLESASASNCFDRNLLGFAENELIQVMRLGLICTSEDPLRRPSMAEVVQVLESIRNGLES* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0643 752 PANTHER - 14 115 - -
Apr7g0643 752 PANTHER - 117 752 - -
Apr7g0643 752 SMART LRR_typ_2 226 250 IPR003591 -
Apr7g0643 752 SMART LRR_typ_2 322 345 IPR003591 -
Apr7g0643 752 SMART LRR_typ_2 274 298 IPR003591 -
Apr7g0643 752 Gene3D Phosphorylase Kinase; domain 1 435 541 - -
Apr7g0643 752 ProSiteProfiles Leucine-rich repeat profile. 276 299 IPR001611 GO:0005515
Apr7g0643 752 Pfam Leucine Rich Repeat 276 298 IPR001611 GO:0005515
Apr7g0643 752 Pfam Leucine Rich Repeat 324 341 IPR001611 GO:0005515
Apr7g0643 752 Pfam Leucine Rich Repeat 302 322 IPR001611 GO:0005515
Apr7g0643 752 CDD STKc_IRAK 471 746 - -
Apr7g0643 752 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Apr7g0643 752 Gene3D Ribonuclease Inhibitor 154 246 IPR032675 -
Apr7g0643 752 Pfam Protein kinase domain 467 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0643 752 Gene3D Ribonuclease Inhibitor 31 153 IPR032675 -
Apr7g0643 752 SUPERFAMILY L domain-like 116 364 - -
Apr7g0643 752 Gene3D Transferase(Phosphotransferase) domain 1 542 751 - -
Apr7g0643 752 PANTHER UNNAMED PRODUCT 117 752 - -
Apr7g0643 752 PANTHER UNNAMED PRODUCT 14 115 - -
Apr7g0643 752 SUPERFAMILY Protein kinase-like (PK-like) 466 744 IPR011009 -
Apr7g0643 752 ProSiteProfiles Protein kinase domain profile. 465 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0643 752 Gene3D Ribonuclease Inhibitor 251 368 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0643 Apr-Chr7 13151972 13155250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0643 5 752 Receptor kinase-like Gene Family AT1G12460 64.636 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Apr7g0643 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0643 - - gmx:100805681 1094.72