Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0613 ATGAGCGGCGAGGAGAGAGAAACTGACGCATACCGAGTTCTGGTGGATCGGTGTCGGAGTCTGGAGGAGAAACAGGCCAAGCTGAGGGAGGAGTTCGACCAACTGGTGCAGGAGAAGAAGCTCACGGTCATTGACGATGAGCAAGTTATTGCTGATTCAACCGTTGGTTTTCTTTCTGGCTCCTTCTTCTCCGACCGTCCCTATGAAAGCGTATTGAAATGCATGGGACACGCCGTTTACGTTCTTAGAGTTCCCTCCGCCGAGATCATATACTGGAATCACTCAGCGGAAACTTTGTATGGATGGAAGTACTATGAAATCATTGGTCAAAGAGTATCTAAGTCCCTAATTGCTGAAGAAAATTATGCATCTCTACAAAAAATTCTGGAAAGGTTGGCCACAGGAGTACCGTGGTCTGGGCAGTTTCCTTTCAAGAAGAGGTCTGGTGAAGTATTTATGGCAATGGTAACAAAAACTCCTCTTTATGAGGATGGTGAACTTGTTGGTGTTATAACTGTTTCAAGTGATGCAGCTATATTGAACTCTAGAAATTCAGAAAATCGAAGAACATATCAATCTGGTGCCGATGGCCAACCTGGAGTGCACAGATTAAACTTCAAAAGGATTCAGTGGCCTCCACGGCCGATGATTGCACCAATGCCACATATTGCATCATCTGTTTCCAATCTGGCATCAAAGTTTCTCCCACGGCGGCATATTGATGACACATTTTCCAGGAATACTTCAACAGATGCAGACGATGAAAAACTAGAGAAGCGTGGCATATATGAAACAAAACCTCATTCCAGACATCACCATAAAGAAAACCCAACTATCGCAGGGGCCTCCGAGAAGGATGAGTCTACTATTGACTCTGGTCAACCTCCTAAAATTGCAGCCAGAGTCCTTGCCAAGCTTCCAATAGGGGGAGGTGGAAAATGTGGGAGGGGTAATGGAAGTATAAAAAATAATACCACAACTGATAGTCGAGGAACCAATAGAGTGAATAACGACAATGATTCATCTGGTGGTTTAGTGCCATTAACTCCACAACAAGATGCCGCTAATGGAGCAGAGAAAATAGAAAATCTTCATAAATGTAATTCTTTAGTGAAGAGAACAGATACAAGAGTCTGTGCATATAGAACTTCCAATGTTTCCAAAGATAGTTCTGTCAAACCTCTCTCAGGGGAGTGGTGTGAATGTTTTGGTTCTCCCATTCCCCAAGATCCATTGATAAGAATACGCTGTCAATCTGATCAGAAGAAATTGGAACCAGAGGCTACAAATGTGGTGACAGAAGATGAAATGCAAAAGCAGCAAGAAGGGTTGCCACTGCCGAGTTCAAGGGAGAGCATAGGCAGCCATGAAAGTTCATCAAGCAAAGGGGATAATGAATCAAACTCTGTTGTAGAGTGTGAAATCCATTGGGAAGACCTTCAATTAAGAGAGGAGATTGGACAAGGTTCTTATGCTGTTGTTTATCATGGAATTTGGAATGGATCGGATGTTGCTGTCAAGGTTTTCTTTGGGAATGGATACGCAGAGGAGACTTTACAAGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAGTATATTCACCAGAAAGGCTTGCCATTGTGACAGAGTTGTTACCCAGGGGAAGCCTTTTCAAAACTCTGCACAACAATCAAACAATAGACATCAGAAGGCGTCTAAGGATGGCTCTTGATGTTGCAAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGACCTGAAGTCTTCAAACCTGCTTGTTGATAAAAACTGGAGTGTGAAGGTTGGAGACTTTGGCCTGTCAAGGTTGAAGGATGCAACTTTATTGACTACAAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCTAATGAGAAGTCTGATGTGTTCAGTTTTGGCGTCATTCTCTGGGAACTAATGACTCAATCTATTCCATGGAAAAATTTGAATTACTTACAGGTTGTTGGAGTCGTGGGCTTCATGGATAGACGACTGGAGCTGCCGGAGGGGCTTGATCCCCATGTTGCGTCAATCATTGATGACTGCTGGCGAAGTGATCCAGAGCAACGCCCGTCGTTTGAAGAGCTTATACAGAGAATGATTTTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAGAACAATTTCAGAATCCTAA 2250 0.432 MSGEERETDAYRVLVDRCRSLEEKQAKLREEFDQLVQEKKLTVIDDEQVIADSTVGFLSGSFFSDRPYESVLKCMGHAVYVLRVPSAEIIYWNHSAETLYGWKYYEIIGQRVSKSLIAEENYASLQKILERLATGVPWSGQFPFKKRSGEVFMAMVTKTPLYEDGELVGVITVSSDAAILNSRNSENRRTYQSGADGQPGVHRLNFKRIQWPPRPMIAPMPHIASSVSNLASKFLPRRHIDDTFSRNTSTDADDEKLEKRGIYETKPHSRHHHKENPTIAGASEKDESTIDSGQPPKIAARVLAKLPIGGGGKCGRGNGSIKNNTTTDSRGTNRVNNDNDSSGGLVPLTPQQDAANGAEKIENLHKCNSLVKRTDTRVCAYRTSNVSKDSSVKPLSGEWCECFGSPIPQDPLIRIRCQSDQKKLEPEATNVVTEDEMQKQQEGLPLPSSRESIGSHESSSSKGDNESNSVVECEIHWEDLQLREEIGQGSYAVVYHGIWNGSDVAVKVFFGNGYAEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKTLHNNQTIDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWSVKVGDFGLSRLKDATLLTTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTQSIPWKNLNYLQVVGVVGFMDRRLELPEGLDPHVASIIDDCWRSDPEQRPSFEELIQRMIFLVNRVTAVSIRTISES* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0613 749 CDD STKc_MAP3K-like 486 731 - -
Apr7g0613 749 ProSiteProfiles PAS repeat profile. 64 136 IPR000014 -
Apr7g0613 749 PANTHER SERINE-THREONINE PROTEIN KINASE 14 735 - -
Apr7g0613 749 TIGRFAM sensory_box: PAS domain S-box protein 86 176 IPR000014 -
Apr7g0613 749 ProSiteProfiles Protein kinase domain profile. 480 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0613 749 Coils Coil 11 41 - -
Apr7g0613 749 Pfam Protein tyrosine and serine/threonine kinase 480 730 IPR001245 GO:0004672|GO:0006468
Apr7g0613 749 MobiDBLite consensus disorder prediction 243 295 - -
Apr7g0613 749 MobiDBLite consensus disorder prediction 318 347 - -
Apr7g0613 749 Gene3D PAS domain 64 193 - -
Apr7g0613 749 ProSitePatterns Protein kinases ATP-binding region signature. 486 507 IPR017441 GO:0005524
Apr7g0613 749 MobiDBLite consensus disorder prediction 426 468 - -
Apr7g0613 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Apr7g0613 749 Gene3D Phosphorylase Kinase; domain 1 473 557 - -
Apr7g0613 749 SUPERFAMILY PYP-like sensor domain (PAS domain) 68 176 IPR035965 -
Apr7g0613 749 MobiDBLite consensus disorder prediction 433 468 - -
Apr7g0613 749 PRINTS Tyrosine kinase catalytic domain signature 554 567 IPR001245 GO:0004672|GO:0006468
Apr7g0613 749 PRINTS Tyrosine kinase catalytic domain signature 592 610 IPR001245 GO:0004672|GO:0006468
Apr7g0613 749 PRINTS Tyrosine kinase catalytic domain signature 639 649 IPR001245 GO:0004672|GO:0006468
Apr7g0613 749 PRINTS Tyrosine kinase catalytic domain signature 658 680 IPR001245 GO:0004672|GO:0006468
Apr7g0613 749 PRINTS Tyrosine kinase catalytic domain signature 702 724 IPR001245 GO:0004672|GO:0006468
Apr7g0613 749 SMART serkin_6 480 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0613 749 MobiDBLite consensus disorder prediction 243 281 - -
Apr7g0613 749 MobiDBLite consensus disorder prediction 311 347 - -
Apr7g0613 749 SUPERFAMILY Protein kinase-like (PK-like) 458 731 IPR011009 -
Apr7g0613 749 Pfam PAS domain 81 176 IPR000014 -
Apr7g0613 749 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 14 735 - -
Apr7g0613 749 Gene3D Transferase(Phosphotransferase) domain 1 559 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0613 Apr-Chr7 12701891 12709428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0613 445 737 MAP Kinase Kinase Kinase AT4G23050 68.367 2.35e-140 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr7g0613 PK_Tyr_Ser-Thr 8.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0613 - - gmx:100813707 1223.76