Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0611 ATGGCCACCGCAAGGTTCCCTAACCATTCCTCCGAGGACATCGTCGATTCTACGCCGCTGTTGGCCAATTCCGGCGTCTCTTCCGACGACCTTAACTCTGGTCGTCGATTTGTCCGGCGACAGAGGCTCCGGCAAGCGGCGCGGTTTCTCCGGCAGGCCAGCGGGAGGAGGATGATGCGTGAACCCTCGATGTTGGTTCGAGAAGCTGCTGCGGAGCAATTGGAGGAGCGCCAGAGCGATTGGGCTTATTCGAAGCCCGTTGTCGTTCTTGACATTGTTTGGAACTTCGCCTTCGTTGTTGTGGCAGCCACGGTGTTGGTTTTGAGCGTAAGCGAAGCACCGGGCATGCCTCTGAGGTTGTGGATAGTAGGGTACGCGTTGCAATGCATTCTTCACATGGTTTGTGTTTGTGTGGAGTATAGGAGGCGAAGGAGGCACCAACGTAACATGGTGGCAGTGCAAGACATGGTTGGTAGCAGCAGTGGGAATTTGAGTTCCGCTTCAAGGGAGGGTTCTGCTTCTGCTTCTGGTTCGGGGCAGTATGTGTCGTTGGCGCAACTTGACGAGGAGGGTACTAGTGTTGCAAAGCATTTGGAATCAGCCAATACAATGTTTTCATTTATTTGGTGGATTATTGGATTCTACTGGGTATCAGCTGGTGGTCAAGCATTAGCCCAAGATTCTCCTCAGCTTTACTGGCTATGTATAATCTTCCTGGGTTTTGATGTTTTCTTTGTCGTTTTCTGTGTTGCACTGGCATGTATAATCGGCATTGCTGTTTGCTGTTGTCTTCCATGCATCATTGCACTTCTTTATGCAGTTGCAGACCAGGAAGGGGCATCAAAGGAAGACATTGAGCAGTTGTCAAAATTTAAATTCCGAAGAATTGAAAGTAATGAGAAACTTACTGGTACTGTGCAAGGACCTGTTGGAGGAATAATGACTGAATGCCAGGCTGATTCACCTATTGAACATGTTCTTGCTGAGGAGGATGCGGAATGTTGCATCTGCCTTTCTTCATATGACGATGGGGTTGAACTAAGAGAACTTCCTTGTGGTCACCATTTTCACTGTGCCTGTGTGGATAAGTGGCTGTATATTAATGCTACATGCCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAATCTCAGTCAAGAGGAAGTGTAG 1170 0.4863 MATARFPNHSSEDIVDSTPLLANSGVSSDDLNSGRRFVRRQRLRQAARFLRQASGRRMMREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAATVLVLSVSEAPGMPLRLWIVGYALQCILHMVCVCVEYRRRRRHQRNMVAVQDMVGSSSGNLSSASREGSASASGSGQYVSLAQLDEEGTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEKLTGTVQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSNLSQEEV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0611 389 PANTHER TARGET OF ERK KINASE MPK-1 8 389 - -
Apr7g0611 389 CDD RING-H2_RNF111_like 333 377 - -
Apr7g0611 389 SMART ring_2 334 374 IPR001841 -
Apr7g0611 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 388 IPR013083 -
Apr7g0611 389 Pfam Ring finger domain 333 375 IPR001841 -
Apr7g0611 389 ProSiteProfiles Zinc finger RING-type profile. 334 375 IPR001841 -
Apr7g0611 389 SUPERFAMILY RING/U-box 324 381 - -
Apr7g0611 389 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0611 Apr-Chr7 12678807 12684654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0611 22 382 C3H Transcription Factor Family AT1G68070 48.901 3.45e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0611 - - gmx:100790497 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1505 10 27487013 27496087 Apr7g0611 7 12678807 12684654 PCT