Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0608 ATGGCGCCAATACCGGCGGAGCAAACCGGTGAATCAGCGCCCGCAGATTCGCAGAGATCCATTCCGACGCCATTTCTGACGAAAACGTACCAGCTCGTGGACGATTCCTCTGCAGATGACCTAATTTCCTGGAACGAAGATGGCACGAGCTTCATCGTTTGGCGACCCGCTGAATTCGCTCGAGATTTGCTTCCTAAGTACTTCAAACACAACAACTTCTCCAGTTTCGTCCGCCAGCTTAACACCTATGTAACCGTCCTGCTTTATTTTCTCTTCATTTCTTGGATTTTCTCAGCATCCAAACGGATTACCGGCGTGTTTTGTTCGCAGGGATTTCGGAAGGTTGTCCCTGACCGCTGGGAATTTGCTAACGACTGTTTCCGGCGAGGTGAGAAAGGTCTACTTCGGGACATACAGCGCCGGAAAATATTGCCGGCGGCGGCGACACCGGCAACAACAGCAGCGACAGCTAATACGGTAACGGTGGCTGTGGCCGCGCCGGCGGCGCCGGCGGTGTCCCCGACGACTTCCGGCGACGAACAGGTACTATCCTCGAACTCATCTCCGATTGCTGCGCATAATAGTAATACAGTGCACCGCACCACAAGTTGCACCACTGCGCCCGAGCTGTTAGAAGAGAATGAAAGGCTTAGGAAAGAGAACGTGCAACTGAGTCACGAGTTGAGTCAGTTGAAGGGTCTGTGTAATAACATACTCGCCTTGATGACCAACTATGCTTCTACTTTTAGTCGCCAGCAGTTAGAATCGTCCACTAGTGCGGTAAGGGCTATGCCTGTGCCTGAAGGGAAAGCGCTGGAGCTTTTGCCTGCAAAGCATGTTTCTGTAGCAGAGGAAGCGGTACATGTGGGAGGCGCTGCCGGTGCCGCACCCTGTGCGACTGCGAATGCGGAGGTTCCCAAGCTTTTTGGGGTCTCAATTGGGCTGAAACGATGTAGGACAGAGAGCGAGGCCGAAGCTGAGGAAGAAGAACAGAATCAAACGCAAACACGATCACAAACACAGACACAATCATCACAAGAACCTGATCCCGGGTCAGATGTGAAATCTGAACCGCTTGATGGTGATGACTCGGATGATCAGGACCATCGTTGGCTGGAGCTTGGGAAATAA 1131 0.5252 MAPIPAEQTGESAPADSQRSIPTPFLTKTYQLVDDSSADDLISWNEDGTSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYVTVLLYFLFISWIFSASKRITGVFCSQGFRKVVPDRWEFANDCFRRGEKGLLRDIQRRKILPAAATPATTAATANTVTVAVAAPAAPAVSPTTSGDEQVLSSNSSPIAAHNSNTVHRTTSCTTAPELLEENERLRKENVQLSHELSQLKGLCNNILALMTNYASTFSRQQLESSTSAVRAMPVPEGKALELLPAKHVSVAEEAVHVGGAAGAAPCATANAEVPKLFGVSIGLKRCRTESEAEAEEEEQNQTQTRSQTQTQSSQEPDPGSDVKSEPLDGDDSDDQDHRWLELGK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0608 376 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 111 361 - -
Apr7g0608 376 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 7 83 - -
Apr7g0608 376 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g0608 376 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g0608 376 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g0608 376 Coils Coil 319 339 - -
Apr7g0608 376 SMART hsfneu3 21 141 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g0608 376 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 83 IPR027725 -
Apr7g0608 376 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 111 361 IPR027725 -
Apr7g0608 376 MobiDBLite consensus disorder prediction 321 376 - -
Apr7g0608 376 MobiDBLite consensus disorder prediction 333 351 - -
Apr7g0608 376 MobiDBLite consensus disorder prediction 353 376 - -
Apr7g0608 376 Pfam HSF-type DNA-binding 25 141 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g0608 376 Gene3D - 17 142 IPR036388 -
Apr7g0608 376 SUPERFAMILY "Winged helix" DNA-binding domain 22 141 IPR036390 -
Apr7g0608 376 Coils Coil 207 234 - -
Apr7g0608 376 MobiDBLite consensus disorder prediction 1 21 - -
Apr7g0608 376 MobiDBLite consensus disorder prediction 171 203 - -
Apr7g0608 376 MobiDBLite consensus disorder prediction 174 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0608 Apr-Chr7 12659767 12661957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0608 16 376 HSF AT4G11660 49.731 3.54e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Apr7g0608 HSF_DNA-bind 7.6e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0608 K09419 - gmx:100791020 484.567