Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0607 ATGTTGGAGGTTAAAAAGGAACTTAAGGATTTCAATGCTGATTCACCTCATCTTTCTTCGTCCAAGTGCAATAGCGATACCTCTCTTCCGGAATCAACCCCTGTAACTGGGAAAATAAAAGCACAAGCTAGACGCTGGACGGAAGAAGAGGATAATCTTTTGATTGAAACGGTCAAGAAGCACCACGGAAGGAGCTGGAAGAAAATAGCTGCATACCTCCCTGGAAGGACTGACGTCCAATGCTTGCATCGCTGGCAAAAGGTTTTAAATCCTGATCTTGTAAAGGGATCCTGGACAAAGGAGGAAGATGATTGCCTCGTTGAACTAGTCAGAAAGCATGGTGTCAAGAGATGGTCTGTTATTGCAAAATACTTACCAGGTCGTATTGGAAAGCAATGCCGAGAAAGGTGGCACAATCATCTTGATCCAGCTATAAAGAAGGATGCATGGACAGAGGAGGAGGAATTAACACTTGCTTACTATCACCAAATATACGGCAGTAAGTGGGCAGAAATTGCAAGGATTCTTCCTGGAAGGACTGACAATGCCATAAAGAATCATTGGAACTGCTCAATGAAGAAAAAACTGGATGCATCACCTCTTCGGTGCGACATAAATGTTGCCACTTCCAGTTTCTGCGCTTCTCGAATAAAGCCAACACCTAAAGTTGAGGATCAAAGTTTTAACAGAATAGTTTCTCTCGATCAGAGTCACTGGTCGAAGCACAGTGTTGATTACTTTTCAACAAAGTTGATTCTTCAAAATGCTGCCAGAGAAGAATGTTGCTATGAAAATGGCTGTTTTGAGGGGATAACTCCTATTGCCTCTAGACAAGGTGGTGAAAGTAGATTGGATAATTTACCAAATGAGATACTCACAGGTACATGTTACGAAGACCATGTCAACGCAGCCAACCCTACCTGCATAATTAAAAATATGGACTCGTTTCTGGAAAATTCTCTGGATATGCTTGCAACAAATTTGAGTTGTTTCCCTCTTGCCAGTGCTGTTACTTACAGTGCCTACAAATCTCCTAAACGACAAAAGGTATCTTTTTCAGATGCAGAGTTTATTGTGGGTGATGAATCTGACAGTCCCCGTTTGAGTTACTCAAAAACGATTAACCGTGAGAAGAAATGTCAATCTGTAAGGAGAAGCTACAACGAAATCAATAGCATGCCACATGATTCAGATGGCATGAGGGGTGAATATGCTTACTTTCCTGCTGAACTACCCCCGGGGGAAGATTTGGCGCCTCCCACAGAATTCAGTGAATGCCTAAGTCCAAAAACACCCATGACATACGCGGACAATAAAAGTCGCTGTTCTACTCCCCCAACGACTTTACTCAGGAGTTACATAGGCGACATCAGCCCAGAAACTGTGCTAAAAAGTTTAGCAATGACCTATAAGAATGTTCCTTCTATTATAAGGAAAAGGACTCCCAGGAAGGCAAGCTGTTGCGACAGTGACCAAGCACCTTCGGGAATGATCACATGTACTCCTGAAGCAGAAAATGTTATTGGCTTCGATAACTTAACACTGAATCAGGGGTTTATGCCATAG 1566 0.4259 MLEVKKELKDFNADSPHLSSSKCNSDTSLPESTPVTGKIKAQARRWTEEEDNLLIETVKKHHGRSWKKIAAYLPGRTDVQCLHRWQKVLNPDLVKGSWTKEEDDCLVELVRKHGVKRWSVIAKYLPGRIGKQCRERWHNHLDPAIKKDAWTEEEELTLAYYHQIYGSKWAEIARILPGRTDNAIKNHWNCSMKKKLDASPLRCDINVATSSFCASRIKPTPKVEDQSFNRIVSLDQSHWSKHSVDYFSTKLILQNAAREECCYENGCFEGITPIASRQGGESRLDNLPNEILTGTCYEDHVNAANPTCIIKNMDSFLENSLDMLATNLSCFPLASAVTYSAYKSPKRQKVSFSDAEFIVGDESDSPRLSYSKTINREKKCQSVRRSYNEINSMPHDSDGMRGEYAYFPAELPPGEDLAPPTEFSECLSPKTPMTYADNKSRCSTPPTTLLRSYIGDISPETVLKSLAMTYKNVPSIIRKRTPRKASCCDSDQAPSGMITCTPEAENVIGFDNLTLNQGFMP* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0607 521 MobiDBLite consensus disorder prediction 9 38 - -
Apr7g0607 521 PANTHER TRANSCRIPTION REPRESSOR MYB5 45 262 - -
Apr7g0607 521 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 145 IPR017930 -
Apr7g0607 521 CDD SANT 149 189 IPR001005 -
Apr7g0607 521 Pfam Myb-like DNA-binding domain 45 89 IPR001005 -
Apr7g0607 521 Pfam Myb-like DNA-binding domain 95 141 IPR001005 -
Apr7g0607 521 Pfam Myb-like DNA-binding domain 147 189 IPR001005 -
Apr7g0607 521 ProSiteProfiles Myb-like domain profile. 90 141 IPR001005 -
Apr7g0607 521 Gene3D - 95 146 - -
Apr7g0607 521 Gene3D - 148 210 - -
Apr7g0607 521 CDD SANT 97 141 IPR001005 -
Apr7g0607 521 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 196 IPR017930 -
Apr7g0607 521 CDD SANT 45 89 IPR001005 -
Apr7g0607 521 Gene3D - 42 94 - -
Apr7g0607 521 ProSiteProfiles Myb-like domain profile. 38 89 IPR001005 -
Apr7g0607 521 MobiDBLite consensus disorder prediction 14 35 - -
Apr7g0607 521 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 89 IPR017930 -
Apr7g0607 521 SUPERFAMILY Homeodomain-like 92 188 IPR009057 -
Apr7g0607 521 ProSiteProfiles Myb-like domain profile. 142 192 IPR001005 -
Apr7g0607 521 SMART sant 42 91 IPR001005 -
Apr7g0607 521 SMART sant 146 194 IPR001005 -
Apr7g0607 521 SMART sant 94 143 IPR001005 -
Apr7g0607 521 PANTHER MYB PROTEIN-RELATED 45 262 - -
Apr7g0607 521 SUPERFAMILY Homeodomain-like 44 99 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0607 Apr-Chr7 12653955 12657772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0607 35 197 MYB Transcription Factor Family AT5G02320 66.871 5.14e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr7g0607 Myb_DNA-binding 6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0607 - - aprc:113869477 1082.78