Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0599 ATGGCGAAGTTGTTAGCGTTAACTTGCTTCCGAAACGAGGGATGGGGCAACCTCTCTCCGCGACCTCACTACCCTTCCATGCCCAAATATCCCAAGGGTGTGGGTCTCACTTCCGCCACCCTCCACCACCCTTCCGAGGCCAGGGCCCTTTTCTCCGTCGTCGGAATGACCTGCTCCGCCTGCGCCGGTTCCGTCGAAAAGACCATCAAACGCCTTCCCGGAATTCGCGAAGCCATCGTCGATGTCCTCAACAACCGTGCCCACGTCATCTTTTACCCCTCCTTTGTTAACGAGGAGACCATTCGCGAGGCTATTGAGGATGCTGGTTTTGAAGCGGCGTTGCTAACGGACGCTACCAATAACAAATCCATTCAAGTGTGCCGCCTGCAGATTAAAGGAATGACTTGCACCTCCTGTTCCTCCACCATCGAATCCGCTCTTCAGGCCCTTCAAGGCGTCCTCAAGGCACAGGTGGCCCTCGCCACCGAAGAGGCCCAAGTCCACTACAACCCCAACGTCATTAGCTACAACCAAATTCTAGAAGCCGTAGAAGATTCTGGATTCGAAGCCGCGCTCATCACTTCAAGCGAGGAGTTGAGCAAGATAGACCTCCACGTGGAAGCAGCTGAACTATCCGATGATTCCACCAAACTCATCGAAGCTTCTCTTCGGGCACTCCCCGGAGTCCTTGGCGTGGACATAACCACCGAACTGAACAAAATAACGCTTTCTTACAAACCCGACGTGACAGGACCCAGGAAATTCATTCGCGTGATTGAGGAAACAGGGTGTGGGAATTTCAAGGCTAAAATATTCCCTCAAGAAGCAGGACCAAGAGATTCTCACAGACGCGACGAAATTAAGCAGTATCATAGATCGTTCTTGTGGAGCTTGGTGTTCACGGTGCCCGTGTTTCTAACCTCCATGGTTCTTATGTACGTCCCTGGAATCAAGCAATTACTGGATGCAAAACTTGTTAACATGGTAACCGTTGGGGAGGTTGCGAGATGGGTGCTAACCACTCCGGTTCAGTTCGTTTTAGGTTGGAGATTTTACTACGGTTCTTACAAATCGTTGCGCCGAGGCTCTGCTAACATGGATGTTTTGGTCGCCTTGGGAACAAACGCGGCGTATTTTTATTCGGTGTACTCTGTTCTGAGAGCTGCTACATCTCGTGATTTCGAGGGCAATGATTTCTTTGAGACGAGTGCGATGCTTATTTCCTTCATTCTGCTTGGAAAGTATCTTGAAATTTTGGCGAAGGGGAAGACGTCGAATGCAATTGCGAAGCTCATGAACTTGACCCCTGACACGGCTATATTGTTGAGTTTGGACGGTGAAGGGAATGTGGTGGGTGAGGAAGAGATTGATAGCAGGTTGGTTCAGAAAAATGATGTGATAAAGGTTATTCCCGGGGCCAAGGTGGCTTCCGATGGGTTTGTTTTGTGGGGGCAGAGTCATGTGAATGAGAGCATGATAACAGGGGAGGCACGTCCTGTGGCCAAGAGGAAAGGTGACTCTGTTATTGGTGGAACTGTGAATGAGAATGGAGTGTTGCACGTTAAGGCAACGCGCGTGGGCTCAGAGAGTGCTCTTTCCCAGATTGTTCGGCTTGTTGAGTCGGCTCAGATGGCCAAAGCTCCTGTGCAGAAGTTTGCAGATCGCATTTCCAAATACTTTGTCCCTCTGGTGATCTTGATCTCGTTGATGACTTGGCTTGCTTGGTTTTTAGCTGGAAGATTTCATGCTTACCCCAAGTCTTGGATACCATCTTCAATGGACAGCTTTGAGCTTGCTTTGCAATTTGGAATATCTGTTATGGTCATAGCCTGCCCTTGTGCTTTGGGTTTAGCTACGCCCACCGCCGTTATGGTTGGCACTGGTGTAGGTGCGTCTCAGGGTGTACTCATCAAAGGAGGGCAAGCATTAGAGAGTGCGCATAAGGTGAACTGCATTGTTTTTGACAAGACGGGTACTCTCACTGTTGGAAAACCTGTAATAGTGAATACAAAACTATTGACAAAAATGGTTCTTCGAGAATTCTACGAACTTGTGGCTGCAGCTGAGGTCAATAGTGAGCATCCACTTGCCAAGGCCATTGTTGAGTATGCCAAAAAATTTAAAGATGAAGAGAGCCCTTCTTGGCCAGAAGCAAGAGATTTTGTTTCCATTACAGGACATGGAGTAAAGGCCAATGTTCACAACAAGGAAATCATTGTGGGTAATAAGAGCCTGTTGGCTGACCATAATATCGCAATCCCTGTTGTTGCTGAAGATATACTCGCTGAAGCCGAAAAGATGGCTCAAACAGGAATTTTAGTATCTATAAATGGGGAAGTAGCTGGGGTTGTAGCAGTATCTGATCCATTGAAACCGGGTGCTCAAGAAGTCATTTCCATTCTCAAATCTATGAAAATTAGGAGCATGATGGTAACAGGGGACAACTGGGGAACTGCTAGTTCTATCGCGAGGGAAGTTGGAATTGAAAGTGTTATTGCTGAGGCCAAACCGGAACAGAAAGCAGAGAAAGTTAAAGACTTGCAGGCTTCTGGGTACACTGTGGCTATGGTGGGGGATGGTATCAATGATTCACCTGCACTTGTGGCAGCCGATGTGGGAATGGCAATAGGTGCTGGTACAGACATTGCTATTGAGGCTGCTGATATTGTCCTCATGAAGAGCAACTTGGAGGATGTCATAACAGCCATTGACCTTTCTAGAAAAACATTTTCCCGTATTCGTCTAAATTACTTTTGGGCTTTGGTTTATAACCTTCTTGGCATCCCAATCGCTGCAGGAGCTCTCTTCCCTTCTACAGGGTTCCGTTTACCACCTTGGATTGCTGGTGCTGCTATGGCTGCCTCCTCTGTCAGCGTTGTTTGTTGCTCTCTGCTGTTGAAATATTATAGGAGACCCAGGAAGCTGGACAACCTTGAGATACGAGCCATAAGGATCGAATCTTCCGTTGATCATATCATGCATGACAATTGA 2991 0.4794 MAKLLALTCFRNEGWGNLSPRPHYPSMPKYPKGVGLTSATLHHPSEARALFSVVGMTCSACAGSVEKTIKRLPGIREAIVDVLNNRAHVIFYPSFVNEETIREAIEDAGFEAALLTDATNNKSIQVCRLQIKGMTCTSCSSTIESALQALQGVLKAQVALATEEAQVHYNPNVISYNQILEAVEDSGFEAALITSSEELSKIDLHVEAAELSDDSTKLIEASLRALPGVLGVDITTELNKITLSYKPDVTGPRKFIRVIEETGCGNFKAKIFPQEAGPRDSHRRDEIKQYHRSFLWSLVFTVPVFLTSMVLMYVPGIKQLLDAKLVNMVTVGEVARWVLTTPVQFVLGWRFYYGSYKSLRRGSANMDVLVALGTNAAYFYSVYSVLRAATSRDFEGNDFFETSAMLISFILLGKYLEILAKGKTSNAIAKLMNLTPDTAILLSLDGEGNVVGEEEIDSRLVQKNDVIKVIPGAKVASDGFVLWGQSHVNESMITGEARPVAKRKGDSVIGGTVNENGVLHVKATRVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILISLMTWLAWFLAGRFHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVIVNTKLLTKMVLREFYELVAAAEVNSEHPLAKAIVEYAKKFKDEESPSWPEARDFVSITGHGVKANVHNKEIIVGNKSLLADHNIAIPVVAEDILAEAEKMAQTGILVSINGEVAGVVAVSDPLKPGAQEVISILKSMKIRSMMVTGDNWGTASSIAREVGIESVIAEAKPEQKAEKVKDLQASGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYFWALVYNLLGIPIAAGALFPSTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPRKLDNLEIRAIRIESSVDHIMHDN* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0599 996 CDD HMA 129 191 IPR006121 GO:0046872
Apr7g0599 996 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872
Apr7g0599 996 Pfam Heavy-metal-associated domain 129 189 IPR006121 GO:0046872
Apr7g0599 996 Gene3D - 43 114 - -
Apr7g0599 996 ProSiteProfiles Heavy-metal-associated domain profile. 219 263 IPR006121 GO:0046872
Apr7g0599 996 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 366 966 IPR027256 GO:0006812|GO:0016021|GO:0019829
Apr7g0599 996 ProSiteProfiles Heavy-metal-associated domain profile. 126 192 IPR006121 GO:0046872
Apr7g0599 996 SUPERFAMILY Calcium ATPase, transduction domain A 453 539 IPR008250 -
Apr7g0599 996 CDD P-type_ATPase_Cu-like 292 967 - -
Apr7g0599 996 SUPERFAMILY HMA, heavy metal-associated domain 43 115 IPR036163 GO:0046872
Apr7g0599 996 SUPERFAMILY HMA, heavy metal-associated domain 122 195 IPR036163 GO:0046872
Apr7g0599 996 CDD HMA 51 113 IPR006121 GO:0046872
Apr7g0599 996 Gene3D - 620 914 IPR023214 -
Apr7g0599 996 CDD HMA 219 263 IPR006121 GO:0046872
Apr7g0599 996 ProSitePatterns E1-E2 ATPases phosphorylation site. 655 661 IPR018303 -
Apr7g0599 996 SUPERFAMILY Calcium ATPase, transmembrane domain M 401 933 IPR023298 -
Apr7g0599 996 Gene3D - 660 737 IPR023299 GO:0000166
Apr7g0599 996 Gene3D - 738 788 IPR023299 GO:0000166
Apr7g0599 996 ProSiteProfiles Heavy-metal-associated domain profile. 48 114 IPR006121 GO:0046872
Apr7g0599 996 PANTHER ATP7, ISOFORM B 5 977 - -
Apr7g0599 996 TIGRFAM TIGR00003: copper ion binding protein 51 112 IPR006122 GO:0005507
Apr7g0599 996 TIGRFAM TIGR00003: copper ion binding protein 129 190 IPR006122 GO:0005507
Apr7g0599 996 SFLD C1.7: P-type atpase like 635 909 - -
Apr7g0599 996 Gene3D - 123 195 - -
Apr7g0599 996 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Apr7g0599 996 Gene3D - 213 271 - -
Apr7g0599 996 ProSitePatterns Heavy-metal-associated domain. 131 160 IPR017969 GO:0046872
Apr7g0599 996 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 5 977 - -
Apr7g0599 996 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Apr7g0599 996 PRINTS P-type cation-transporting ATPase superfamily signature 653 667 - -
Apr7g0599 996 PRINTS P-type cation-transporting ATPase superfamily signature 782 793 - -
Apr7g0599 996 PRINTS P-type cation-transporting ATPase superfamily signature 804 814 - -
Apr7g0599 996 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Apr7g0599 996 PRINTS P-type cation-transporting ATPase superfamily signature 880 892 - -
Apr7g0599 996 Gene3D - 421 543 - -
Apr7g0599 996 SUPERFAMILY HMA, heavy metal-associated domain 216 265 IPR036163 GO:0046872
Apr7g0599 996 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 406 940 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr7g0599 996 SFLD p-type atpase 635 909 IPR044492 -
Apr7g0599 996 SUPERFAMILY HAD-like 652 963 IPR036412 -
Apr7g0599 996 Pfam E1-E2 ATPase 452 631 - -
Apr7g0599 996 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Apr7g0599 996 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Apr7g0599 996 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Apr7g0599 996 PRINTS Copper-transporting ATPase 1 signature 149 170 - -
Apr7g0599 996 Pfam haloacid dehalogenase-like hydrolase 649 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0599 Apr-Chr7 12532050 12536646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0599 3 986 Primary Pumps ATPases AT1G63440 74.874 0.0 1519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0599 K17686 - gmx:100816893 1651.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0599 7 12532050 12536646 Apr7g0599 7 12532050 12536646 ECH
Apr7g0599 7 12532050 12536646 Apr2g1187 2 18101255 18108097 PCT